Sphingobacterium siyangense: JVX97_16330
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Entry
JVX97_16330 CDS
T08059
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssiy03036
]
JVX97_16330 (smc)
Chromosome and associated proteins [BR:
ssiy03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JVX97_16330 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
SMC_hinge
AAA_15
AAA_21
AAA_29
ABC_tran
DUF1192
Motif
Other DBs
NCBI-ProteinID:
QRY55603
LinkDB
All DBs
Position
complement(3848935..3852477)
Genome browser
AA seq
1180 aa
AA seq
DB search
MQLTKLEIKGFKSFGDKITINFNDGVTAIVGPNGCGKSNVVDAIRWVLGEQSTKMLRSDK
MENIIFNGTKNRKPANLAEVSLTFNNNNNILPTEFSTVTVTRKLFRNGDSEYRLNDVKCR
LKDITDLFLDTGVGADSYSIIELKMIDEIINNKDNSRRNLFEEASGISKYKVRKKQTLAK
LRDTEADLSRVDDLLYEITKNLKSLENQAKKAEKYTSLKAEYRQSSIDLAYYRIADFSTE
LERLQTQESKVQKDAVNAQQNILNAETELQILRQTNLEQEKNLSVQQKTTQEFVNKIRGY
ESEKKIKNEKVKNLQDKENRLNLDINSDKQQLNHVLYTIKRLNEELFDEQNKLDSLKTNL
ESDKTEVDELRGQQQSAKGKLDIFNKSNAELQAKIYKLEKDLAVFTIQKEALLQESVRNS
VDTEAKEAELQQFNFSVMELEGRVEAQQLQYDSANQQEEELQGQINQCQTNLEEFKAQLA
KDLRLVDAKQNEYNLTKSLVDNLEGFPDSIRFLKKNAGWKKQPPLLSDVLFCQEDYRVAI
ENYLEPIMNHYVVETQQDAVQAIQLLSDAAKGRANFFVLDAIVDSPSAVPAPNDNLMSAL
DVINVDEKYKALCTMLLQQVFILKHENEKELDEKLPALGQVILQKNGRYSKHHLGLSGGS
VGLFEGKRIGRAKNLEVLSQEIKTLNQEIAKLEDKITAETARLDALRGNSQKELIDELRF
QLNRLNNELITVKTKQEQYQAFINNSQARKRDIQEKIEGIESDLKIAEPQLQELRLEKEQ
SIAELSTLQDQFHEISEVLNEKSTAYNQENIAYHQQLNKVSNITKDLEFRETQKDDHEIR
VERNSAELVEVQEALRTTIPFEDEEDQDLIAMYEQKIALEDGLKELEDGYYADKQKINNL
EDALTQQRRSKEQSDFLVSEIKDKKTGLQIDLNALKERLSVEFNVELKDLIDREDVPEIT
EDQTTLATKCSKLKKQLDEFGTINLMAKEAFDEMNERYDFINKEKADLIEAKGSLMATIK
EIDDTAQVQFMFTFDAVRNNFVKVFRSLFNEEDSCDLVLTDPSNPLDSDIDIIARPKGKR
PLSINQLSGGEKTLTSTALLFSLYLSKPAPFCIFDEVDAPLDDTNIDKFNNIIRDFSKNS
QFIVVSHNKKTIASTDIIYGVTMVEQGVSRVVAVDLREVA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgcagttaaccaaactagaaattaaaggatttaagagtttcggagacaagatcacgatc
aacttcaatgatggtgtcacagcgattgtcggccccaatggatgtggaaagtccaatgtg
gtcgacgccatacgctgggtactgggggaacaaagtacaaagatgcttcgctccgataaa
atggaaaatattatcttcaatggaacgaaaaatagaaagccggcaaaccttgcagaagtt
tcgctgaccttcaacaacaacaataatattttaccaacggaattctctacagtaaccgtc
acccgtaagctgtttcgcaacggcgatagtgaatatcgattgaatgatgtcaaatgtcgt
ttaaaagatatcacggatctgttcctggataccggagttggtgccgacagttattcgatc
atcgaattgaaaatgattgatgaaattatcaacaacaaagataattcacgtcgcaacctc
ttcgaagaagcatccggaatctcgaagtataaagttcgtaaaaaacaaactttagcaaag
ctgagagatactgaagccgatctttcccgtgtggatgacttgctttacgaaatcacaaag
aatctcaaatcattagaaaatcaagctaaaaaagctgaaaaatatacctcccttaaagca
gaataccgccagagcagtatagatttggcttattatagaattgctgatttttcgaccgaa
ttagaaagacttcagacacaagaatccaaggttcaaaaagatgccgtcaatgcacagcaa
aatattctgaacgcggaaactgaactccaaatactccgccagacaaatttggaacaggaa
aaaaacctttcggtacagcaaaaaacaacacaggaatttgtcaataaaatccgaggttat
gaatcggaaaagaagatcaaaaacgaaaaagtcaaaaatcttcaagataaagaaaaccga
ctgaacctcgatatcaacagcgataaacaacagcttaatcacgtcctctacaccatcaaa
cgactgaatgaagaattgtttgatgagcaaaataaactcgattcgttaaaaacaaatctt
gaatcggataaaaccgaagtcgacgaattgagaggacagcaacagtctgcaaagggaaag
ctcgatatttttaataaaagcaatgctgaattacaggcaaaaatctacaaattagaaaaa
gatcttgcggtattcacaattcagaaagaagctcttctgcaagaatctgttcgcaatagt
gtagatacagaagcaaaagaagccgaattgcagcagttcaatttctctgttatggaattg
gaaggccgtgtagaagcacagcagctacagtacgattcagcaaaccagcaggaagaagag
ctccaaggacagattaatcagtgccagacaaacctcgaggaatttaaggcccagcttgcc
aaagatctccgcctggtagatgccaaacaaaacgaatacaacctcacgaaatcccttgtt
gataatttagaaggtttccccgattccattcgcttcctcaagaaaaatgcaggctggaaa
aagcagcccccactcctatcagatgtccttttctgtcaggaagattaccgtgtggctatt
gagaactacctagagcctattatgaaccattatgttgtcgaaacacaacaagatgctgtt
caggctatccaactattgagcgatgcagcaaaaggaagagctaatttctttgttttagat
gccatagtagattccccaagcgctgtccctgcaccaaatgacaatttgatgtctgcgtta
gatgtgattaacgtagacgaaaaatacaaggctttatgtacgatgctgctccagcaggtc
ttcatccttaaacatgaaaatgaaaaggagctggatgaaaagctacctgctctaggacag
gtgattctacaaaaaaatggacgttattcgaaacatcatttgggcctttcgggtggttcg
gtgggattatttgagggcaaacgtatcggaagagcgaaaaaccttgaagtgctatcccaa
gagatcaaaaccttaaatcaagaaatagcaaaacttgaagataaaataacggccgaaaca
gctcgtttggatgcactgcgtggcaattcacagaaagagttaatcgatgagcttcgcttt
cagctcaatagactgaataatgaattaattaccgtcaaaacaaagcaagagcaataccaa
gccttcatcaataactcccaggcccgtaaaagagatattcaggagaaaattgaaggcata
gaatcggatttaaaaattgcggagccacagcttcaggagcttcgtctggaaaaagaacag
agtatagccgaattatcgactttacaagatcagttccatgaaatatctgaggtacttaac
gaaaaatcaaccgcatacaatcaagagaatatcgcttaccatcaacagttaaacaaagtt
tccaatatcacaaaagatctcgaatttagagagacgcagaaagatgatcacgaaatccgt
gtggagcgaaacagtgcagaattagttgaagtgcaggaagctttaagaacaaccattcca
tttgaagatgaagaagatcaggatcttattgccatgtatgagcagaagatcgccctggaa
gatggtctcaaagaattggaagacggctactatgcagataagcagaaaatcaataacctc
gaagatgctctgacacagcagcgtcgttcaaaagaacagagtgactttcttgtttcagag
atcaaagataaaaaaacgggtcttcagatcgacctcaatgccttgaaagaacgtctttct
gttgaattcaacgttgaactgaaagacctgattgatcgtgaagatgtgcctgagatcaca
gaagatcagacgacattagcaaccaaatgcagtaaactcaagaaacagcttgatgaattt
ggaacgatcaatctaatggcaaaagaggcttttgacgagatgaatgaacgctatgatttc
attaacaaagagaaagctgatttaatcgaagcaaaaggctcattgatggcaacaataaaa
gaaattgacgataccgctcaagttcagtttatgtttacattcgatgccgtaaggaataac
ttcgtcaaggtattccgttcgctatttaacgaagaagacagctgcgacctggtgctcaca
gacccaagcaatccgctggattcagacatcgacattattgcaaggccaaaagggaaaaga
ccgctgtctattaatcagctttcgggtggtgaaaagaccttgacttcaacagccttgtta
ttctcactctatctttctaaaccggcacctttttgtatattcgatgaggtggacgctccg
ttggatgatactaatattgataaattcaataatattatccgggatttttccaagaattca
caatttatcgtggtctcacacaataaaaaaacgatagcaagtacagacatcatctatggc
gtaaccatggttgaacaaggtgtatcccgtgtagttgcagtagatctaagagaagttgct
tag
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