Sphingobacterium siyangense: JVX97_16715
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Entry
JVX97_16715 CDS
T08059
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssiy03400
]
JVX97_16715
DNA repair and recombination proteins [BR:
ssiy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JVX97_16715
Archaeal homologous recombinant proteins
JVX97_16715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QRY55676
LinkDB
All DBs
Position
complement(3934608..3937646)
Genome browser
AA seq
1012 aa
AA seq
DB search
MIPLKLTLEGIYSYQERQTIDFTALSQAGLFGIFGAVGSGKSSILEAITYALFGETERLN
ARDKRAYNMMNLKSNRSYIELDFVNFEDRTFRITREFKRNSKNFDDVKSPTVVLYEKINE
EWVPLESSNTQHIIGLSYENFKRTIIIPQGQFKEFIELGAKERTDMMKEIFQLHRFDLQD
KVSNLYKKNQSELDHLNGQLIGFDEVTSEQIETTETNLQLAVESFVAIESSYKSHHEKFL
RLKKLKEDVLELRTVKALFQQLLEQKGEKETLRLKLNRFEEAQTNFLHILKSKEKLAQEG
LIAHKRVETEKQRQAEIQQLMQEHSSNLNLLKSQYELLPQRRVQELDLELISQLITFSNE
IKSLQDRAQKGRNFVEETRAQQRHFKAKIQETEIQIASLKQSKPSAHELMELGQWYTKQQ
GIQQQEDDLNKQAIDLETSIAVLKQELQAIHPDLEKFRSNHLLVASALEQKLQSLQDEKS
HLLLQQRLTQYAENLKAGSPCPLCGALEHPAINQGQDISQEVAANEKLIAEANESLKHQQ
DQQFQVEKLQLRLQSLNDQQQDLNTKIQLNANNKIVHAQQFTWIGYSATDESSYTSNKQE
LARIETQITTVEQQLGEHQATLASVEEKLEKYNKALHQFERDEASKQAQINQNMGNLKAL
RWSDYEMRESEAVEKEYTALKRSNLEIERDYITLSERLNELNSQFAAQNSLVQTIVEQLA
DIRRESQETDATIQQLLVASPFETLAEIQQILAENLSVIQIRQELEQFQIQFETVKAQIS
QSEKKLVDQVYDENEFLAQEKILDESAQQLKASTESVARLQQERDQLKIAYAKKENLLQQ
QVKLNLRQDNLKQLFNLFKGAGFVQYVSSIYLRQLCDHANIRFHRMTRNQLSLQLNDNNE
FEIIDYLNEGKSRSVKTLSGGQAFQVSLSLALALAESVQSNSRAAKNFFFIDEGFGTQDI
TSVNIVFETLLDLHKENRIVGIISHVEELKERIPVSLSIEKDEEQGSQIFIN
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgattccattaaagctaactctagaggggatatactcttatcaagaacgtcagacgatc
gactttaccgcgctttctcaagctgggctttttggtatcttcggtgctgtaggctccggt
aaatcatcgatattggaagcgattacctacgccttatttggagaaacggaacgcctgaat
gcacgggataaacgcgcttataacatgatgaatctcaagtccaatcgatcttatatcgag
cttgattttgtcaattttgaagaccgtacatttagaattacccgcgaatttaaacgcaat
tccaaaaatttcgatgatgtaaaatcccccacggttgtactctacgaaaaaataaatgaa
gaatgggttccactggaaagcagcaatacgcagcatatcattggattaagctatgagaac
tttaaaagaacaatcatcattccccaagggcagttcaaagagtttatagaacttggcgcc
aaggaacggacggatatgatgaaagagatttttcaactgcatcgatttgacctgcaggat
aaagtttccaacctctataaaaaaaatcagtccgaactggatcacctcaacggtcaatta
ataggttttgacgaggttacaagcgaacagatagaaacgaccgaaacaaatctccaacta
gcagtcgagtcctttgtcgcgattgaatcgtcgtacaagtcgcatcatgaaaagttctta
aggctcaaaaaactcaaagaggatgtcttagagcttcgtacggtgaaggcgctctttcag
caattgctagaacaaaaaggtgaaaaagagaccttacgattaaagttaaaccgctttgag
gaagcgcaaaccaactttctacatattcttaaatccaaggaaaaattagcacaagaaggc
ctaattgcacataaaagagtagaaaccgaaaaacagagacaggccgaaattcagcagctg
atgcaggagcattcctcaaatctcaatctgttgaaatcacaatacgaactgctgccgcaa
cgtcgtgtccaggaactggatcttgaattgataagccaattgattacgttttcaaatgaa
attaagagtttacaggatcgggcacagaaggggcgcaattttgtggaggaaacaagagcg
caacaacgacattttaaagccaaaatccaagagacagaaattcagatcgctagtctaaag
caatcaaagccttctgcccatgaactcatggagctgggccagtggtacaccaaacagcag
ggcatccaacaacaggaagacgatctaaacaagcaggccattgatttagaaacaagtata
gctgtgctgaagcaggaactccaggccattcatccggacctcgaaaaattccgatcaaat
cacctccttgtagccagtgccctcgagcaaaaacttcagtctctccaagatgaaaaatca
catcttctcctgcagcaaaggttgacccaatatgcagaaaaccttaaagcaggatcccca
tgtccactatgtggagcattggaacatcctgctatcaaccaaggacaggatatttcccag
gaagttgccgccaatgaaaaattgattgccgaggcaaatgaaagtcttaagcatcaacag
gaccaacaattccaagtcgaaaaactccagctgcgcttgcagtcattaaatgatcagcaa
caagatctaaacacgaaaattcagctgaatgccaataacaaaattgtgcatgctcagcaa
tttacatggatcggttatagcgctacggatgaatccagctacacatcaaataagcaggaa
cttgcccggatcgaaacacagataacaacagtggagcaacagcttggtgagcaccaggct
acactcgcttccgttgaggaaaagctggagaaatacaataaagcactgcatcagtttgaa
cgtgatgaagcaagcaaacaggcccagattaatcaaaatatggggaacctgaaagcgctg
cgctggtctgattatgagatgcgggaatccgaagcagttgaaaaggaatatactgcactg
aaaagatcaaatctggagattgagcgcgactacattactttaagcgaacgattaaatgag
ttaaacagtcaatttgcagcacaaaacagcttggtacagacgattgttgaacagcttgca
gatatccgtcgtgaaagtcaagaaaccgatgctacaatccagcagctacttgtagcttca
ccctttgaaactttggcagagattcagcaaattcttgccgagaatttgtctgtcatacag
atccgacaagagcttgaacagtttcaaatccagtttgaaactgtgaaggcacagatcagt
cagtcggaaaagaagctcgtcgaccaggtatatgacgagaacgaatttcttgcacaagaa
aaaatcctggatgagagcgcccaacaattgaaagcgagcactgaatctgttgcccgactt
cagcaggagcgcgatcagctaaaaatcgcctatgcaaaaaaggaaaatctcctgcaacaa
caggtaaaactaaatttacgccaggacaatttaaagcaactttttaatctctttaaaggt
gcgggctttgtacaatatgtttcttcgatttacctaaggcaactgtgtgatcatgcaaat
attcggttccatcgcatgacccgaaatcagcttagcctacagctgaacgacaacaatgaa
tttgaaattatagattatttgaatgagggaaaaagtcgcagtgtaaaaacattatccggt
ggacaggcatttcaggtatccctaagtttggccttggctttggccgaaagtgtacagtca
aattcgcgtgcggccaaaaacttcttttttatcgatgaaggttttggaacacaagatatc
acttctgttaatattgttttcgaaacgctattggatttacataaggaaaaccggatcgtc
ggtattatttcacacgttgaagaactcaaagaacgtattccagtgtccctttcgatagaa
aaggacgaagaacagggtagccaaatttttatcaattaa
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