KEGG   Sphingobacterium siyangense: JVX97_19630
Entry
JVX97_19630       CDS       T08059                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ssiy  Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:ssiy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssiy03400]
    JVX97_19630
Enzymes [BR:ssiy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JVX97_19630
    5.6.2.6  RNA 3'-5' helicase
     JVX97_19630
DNA repair and recombination proteins [BR:ssiy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    JVX97_19630
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII TcdA_TcdB_pore Ints3_N Cas3-like_C_2
Other DBs
NCBI-ProteinID: QRY56216
LinkDB
Position
4584105..4586567
AA seq 820 aa
MNTTLAHSEGFRIVNGYFETQGKVPFSFQTKAWEKYTQGYSGLVIAPTGFGKTFSLFMAV
LMDFLNHPEQYHKGLKLLWITPLRSLAKDLARAMQTAIDEIGLDWIVQVRNGDTDPKIKA
QQTRSMPDVLLVTPESLHLLLAQKQRDKYFKNLRCVTVDEWHELMGNKRGVMVELALSFL
KSYTKNLRVWGITATIGNLDEAMEVLLPQAAKRIQIVAKEKKKIAIKPIFPSTVELLPWA
GHLGGNLVDQVVPIILASKSTILFTNTRSQSEMWYQLLLEAHPDFAGQIALHHSSIDAHI
REWIEDNLSSGKLKAVVSTSSLDLGVDFKPVDTVIQVGSSKGVARFMQRAGRSGHSPFET
STIYFVPTHSLELIEVAALKEAVKTQTIENRDPMVQTFDVLVQFMVTIALGGGFRSEELH
AIVANTHAFRYMDTEEWQWCMYFITAGGKIGKRYEEFHKVIQDEEGKWIIKNRRLALLHR
LNIGAIVGDAMMRVKFLSGGYIGMIEEYFISKLKKGERFILAGRILEVVMVKEMTVFVRN
SSGKAITPSWLGGRLPLSSNLSHFLRKKLATATDAPSSEKELHFLAPLIEKQAELSAVPS
EAEFLVEHIKTREGHHLFFYPLEGRLIHEVMAALIAYRISKLYPISFSMAMNDYGFELYS
DKEIQLSQTQLEQLLSRTNLMDDVISSINAAEMASRKFRDIAVISGLVVQNYPGTQQNNK
SLQASSGIIFRVLMEHDPTNLLLKQAFSEVFNQQLEEHRLIKAFERINHSKIRYTFVEEY
TPLSFPIKVDSLRQSLSSEALIERIQRMEKTNAQKKKRRK
NT seq 2463 nt   +upstreamnt  +downstreamnt
ttgaacacaacgttagcacatagtgaagggtttcgaattgtcaacggctatttcgaaacc
caaggaaaggtcccctttagctttcagaccaaggcctgggaaaagtatacccagggatat
agcggactggttattgcccctacgggtttcggaaaaaccttttccctttttatggcggta
ctgatggacttcctcaatcatccagagcaataccataaggggctaaagctgctttggatc
acacccctgcgctccttggccaaagatcttgcgcgggccatgcaaacagcaatagacgaa
attggactcgactggatcgtacaggtccgtaatggtgataccgaccccaagatcaaagcg
cagcaaacccgctccatgcccgacgttctgctcgttactccagaaagcctgcacctactg
cttgctcaaaaacaacgcgacaaatattttaagaatctgcgatgtgtgacggtagatgag
tggcatgaacttatgggcaacaaacggggcgtgatggtcgagctggcactttccttcctg
aaatcgtatacgaaaaacctgcgcgtctggggtatcacagcaaccatcggtaaccttgat
gaagccatggaagtgttgcttccacaagctgcaaaacgtatccagatcgttgccaaggag
aaaaagaaaattgccatcaaaccgatattccccagcacagtggagctccttccttgggca
gggcacctcggtggaaacctcgtcgatcaggtcgtcccgattatccttgctagcaaaagc
acgatcctctttaccaacacgcgtagtcaaagtgaaatgtggtaccaattactacttgag
gctcaccccgattttgccggacaaatcgccttacaccacagctccattgacgcccatatc
cgcgaatggatcgaagacaatctcagcagtggcaaacttaaagcagttgtatcgacctct
tcgttggacttaggagtggatttcaaacccgttgatacagtcatacaggttggctcaagt
aaaggtgtagcccggtttatgcaacgcgctggaagaagcggacatagccctttcgaaacc
tctacaatttatttcgtccccacgcactccctggagctcatcgaagtcgccgcccttaag
gaggccgtaaaaacgcagacgatcgaaaaccgggatcctatggttcaaactttcgatgtg
cttgttcaattcatggtaactatcgccttgggtgggggatttcgttcggaagaactgcat
gcaatcgtcgccaatacccatgcctttcgctatatggatacggaagaatggcaatggtgc
atgtattttattaccgcaggtggaaaaataggcaaacgctacgaagaatttcacaaggtt
atccaagatgaagaaggcaaatggatcatcaaaaaccgtcgtcttgcactgctccacagg
ctcaatatcggtgccattgtcggtgatgctatgatgcgcgtgaagtttctctccggcggc
tacatcggcatgatcgaagaatactttatcagcaaacttaaaaaaggtgaacgctttatt
cttgcggggcggatactcgaagttgttatggtcaaggaaatgaccgtatttgtaagaaat
tcgtcgggcaaagccattactccaagctggcttggtggcagacttcccttatcgtccaac
ttgagccatttcctaagaaaaaaattggctacggcaacagacgctccttccagtgaaaaa
gagcttcatttcctggcaccactgatcgaaaaacaggccgaactttcggccgtgccgagc
gaagcggaatttctcgtcgaacatatcaaaaccagggaaggccatcatttgtttttctac
cccttggaaggcagattgatccatgaggtcatggcagcacttatcgcctaccgcatcagc
aagttgtatcccatcagcttttccatggccatgaatgactatggcttcgaactctattcc
gacaaagagatccagctcagccaaacgcagctcgaacagctcttgagccggactaatttg
atggatgatgtgatcagcagtataaacgctgcagagatggccagccgcaaatttagggat
atcgccgtcatttcgggactggttgtccagaactacccaggcacacagcaaaacaacaaa
tcattgcaggcctcctcagggattattttccgcgtactgatggaacacgatccaaccaac
cttttgctcaaacaagctttttccgaagtgttcaaccagcaactggaagaacatcgatta
ataaaagcatttgaaaggatcaatcatagcaaaatacgctatacctttgttgaagagtat
acgccattgagctttccgataaaagtggatagcctccggcaatccctgtcgagcgaagcc
ttgattgaacggattcaacgcatggaaaagaccaatgctcaaaaaaagaagcgcagaaaa
tga

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