Sphingobacterium siyangense: JVX97_21370
Help
Entry
JVX97_21370 CDS
T08059
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssiy02000
]
JVX97_21370
Transporters [BR:
ssiy02000
]
Other transporters
Pores ion channels [TC:
1
]
JVX97_21370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
DUF3869
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
QRY56541
LinkDB
All DBs
Position
complement(4990775..4993912)
Genome browser
AA seq
1045 aa
AA seq
DB search
MISKQLLSRGMAVVVMTSVTSLVWAQSFTGSVVSADSGLPIGGASISVKNQKISTSSDES
GKFSLAASTGTVLTITYVGYKTEEVKITGPNMVIRLQPQASDLEEVVVIGYGVQKKKLNT
GANLKVEGEELQKRNQLNPLQSLQGQAPGVSITSTSGQPGADMKVVVRGLGTIGNSGPLY
VIDGVPGGDISVLNAADIQSIDVLKDAASAAIYGSQAANGVILVTTKMGAAGKNVLSFDG
YTGIQNVSRKAKLLNADQYKLIMNEQSLNSGAAVIDFNGMDGLANTNWMDYMFKDNAKMD
NYNVALTGGNEKSTYALSMNYIGQEGIVGGKDVSNYQRYGFRTNSEHKLFDNFVKIGQHL
NFNYIKNRGISVGNQYSNTLRGAFATSPLSPVYSDNGLYGSPFNDTSNSPWYNGDSNPYG
VMMTNSNNANDGQKLLADIFAEIEPIKGLKVRSLLGFNYYASEYRSFTPLYRFSIYTYNQ
DHTTTSQNMSKGHTLTWTNTASYDFDINTDHRFSAMVGMESLRYQGTYLSGSNWNLLSQF
NDFAHAYLDNTTGQAHLDEKGNVVETRTVSGKPENITRRVSYFGRLGYNYKEKYLLNATL
RADGSSKFSRSNRWGYFPSVSAGWVISSEEFFKEHLAAVNFFKLRASWGQVGNQDIADFQ
YAAPISTSTGITSSNPGAHYVFGTSNNNIAGAYPSRLSNPNLTWETSEQTNIGFDAKFAN
SRLDVVADFYVKKTKNWLVTAPVLATTGTLPPFINGGDVKNTGVELGLNWADKINEVKYR
LGVNGAYNKNKVGQIPTEDGIIHGQTAMLYDNSEEFYRAANGLPIGYFWGYKTDGLFQNQ
AEIDAWKTAGKGILQADVKPGDVKYVDQNNDGIINASDKTNLGVGMPNFTYGFNIGLDYK
GFDFSVNAYGSLGNKIVQSYRNHANKQANYTTRILDRWTGEGTSNTIPRVTETNVNWQFS
DLYIQDGDFLRISNVTLGYDLSKLIKWKYANQIRFYVQGQNLFTFTKYDGMDPEIGYGTD
GWVSGIDLGYYPRPRTVLFGLNVKF
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgataagcaaacaattgttgagcaggggcatggccgtcgttgtcatgaccagcgtgacc
tctttggtctgggcacaatccttcaccggatcggttgtttcggctgattcaggattgccg
atcgggggcgcgagtatcagcgtaaagaatcagaagatttcaacgagcagcgatgaatcg
ggcaagttttctcttgcagccagcacagggactgtattgaccattacttacgtagggtac
aaaacggaggaagttaaaattactggtcccaatatggtgatccgcctacagccgcaagct
tccgatctcgaagaggtggtggtcattggctacggtgtacaaaagaaaaaactgaataca
ggagccaatttgaaggtggagggtgaagaactgcagaaacgcaatcaattgaacccgctg
cagtcgcttcagggacaagcacctggtgtatccattacatcaacttccggtcagccggga
gcagatatgaaggtcgtcgtccgggggctgggaacaatcggaaattcgggccccttgtat
gtcatcgacggcgttccgggaggggatatttcggtcttgaatgcggccgatatccaatct
atcgacgtactgaaagacgcagcctcggccgctatctatggttcgcaggctgccaatggg
gttatcctggtcaccaccaaaatgggcgctgcgggaaaaaatgtgctgtcgtttgatggc
tatacgggcattcagaacgtttcgcgtaaagcaaaattgctgaatgcagatcagtacaag
ctgatcatgaatgagcaatcgctgaattcgggggccgcggtgattgattttaacggcatg
gacggtctggccaataccaattggatggattacatgttcaaggataatgcaaaaatggac
aattacaatgttgccctgaccggcggcaatgaaaaatccacctacgccttatcgatgaac
tatattggtcaggaggggattgtaggcggcaaagacgtttccaactatcagcgttatggt
ttccgtacgaattcggaacataaactctttgataactttgtgaaaataggtcagcacctc
aactttaactacatcaaaaatcgaggcatcagtgtcgggaatcagtacagcaatacgctg
cgcggtgcttttgccacttcgcccttgtcaccggtgtattcggacaatggcttgtacgga
agtcctttcaatgatacctccaattcaccttggtacaatggggacagcaatccatatggg
gtgatgatgaccaattcgaacaacgccaatgatggccaaaaattattggccgatatcttt
gcggaaatcgaaccaatcaaaggcctaaaggtccgctcattgctgggatttaactattat
gcttcagaatacagaagttttacgcccttataccgcttctccatctacacctacaaccaa
gatcatacaacaacctcgcagaatatgagcaaaggtcatacgctgacctggacaaataca
gcttcttatgactttgatatcaatacggatcatcgcttttcggccatggtcggtatggaa
tcgctacgttaccagggaacttacctttcggggtccaattggaatctgctttcgcagttc
aatgattttgcacatgcttacctggacaataccacaggccaggcgcacctggatgaaaaa
ggtaatgtcgtcgaaacgcgtacggtgtctggaaaacctgagaacatcacccgtagggtc
tcgtactttggacggctgggctacaattataaggaaaagtacctgttgaatgctacattg
cgtgcagatggatcctctaaattttcgcgcagcaaccgctggggatatttcccttcggta
tcggcaggctgggtaatttcttcggaagagttttttaaagaacatttagcggctgtaaac
ttctttaaactccgcgcttcatgggggcaagtgggtaatcaggatatcgctgattttcaa
tatgcggcacccatcagtacctcaacaggcattacatcgtccaaccccggtgcacattat
gtttttggaacgagcaacaataatattgccggggcttatccgagccgcttatccaatccg
aatctgacctgggaaacttccgaacagaccaatatcggatttgatgccaaatttgcgaac
agtcgtctggatgttgttgccgacttttatgtcaaaaaaacgaaaaactggctggttaca
gcgcctgttttggcgacaaccggaacgttgcccccttttatcaatggcggtgacgtgaag
aatacaggggtggaactgggactaaattgggcggataagatcaatgaagtcaagtatcgc
cttggggtaaatggagcctataacaaaaataaggttgggcagataccaactgaagatggt
attatccacggacagacagccatgttatacgataactcggaagaattttaccgtgccgca
aacggcctacccattggctacttctggggctataaaacagacgggctattccagaaccaa
gccgagatcgacgcctggaaaacagccgggaaaggtatccttcaagcggatgtaaaaccg
ggcgatgtgaaatatgtagatcagaataacgatggtattatcaatgcctcggataagaca
aatttgggcgtgggcatgcctaattttacctatggatttaatattggactggattataaa
ggatttgatttctcggtgaatgcctatggttcccttggaaacaaaattgtacagtcttac
cgcaatcatgccaataaacaagcaaactataccacaagaatattagaccgatggaccggg
gaaggtacttccaatacgatcccccgtgttacggaaactaatgtcaattggcagttttca
gacctctatattcaggatggagactttcttcggatcagcaatgtgaccttaggttatgat
ctgtcgaagctgatcaaatggaagtatgctaatcagatccggttctacgtacaggggcaa
aacctgtttacgttcaccaaatatgatgggatggatcccgagatcggttatggaacagat
ggttgggtatcgggcatcgacctcggttactatccaagaccaaggactgtattatttggc
ctaaatgttaaattctaa
DBGET
integrated database retrieval system
