Sphingobacterium siyangense: JVX97_21765
Help
Entry
JVX97_21765 CDS
T08059
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy00300
Lysine biosynthesis
ssiy00470
D-Amino acid metabolism
ssiy01100
Metabolic pathways
ssiy01110
Biosynthesis of secondary metabolites
ssiy01120
Microbial metabolism in diverse environments
ssiy01230
Biosynthesis of amino acids
Module
ssiy_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JVX97_21765 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JVX97_21765 (lysA)
Enzymes [BR:
ssiy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JVX97_21765 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QRY56615
LinkDB
All DBs
Position
complement(5102870..5104030)
Genome browser
AA seq
386 aa
AA seq
DB search
MINTGIAAKFAEKETPFYYYDLNVLNKTLEAAHAASHKRGFHVHYALKANFNDELLKAIQ
EIGFGADCVSGNEVKKAIECGFDSKKVTFAGVGKSDKEINYALDQNIFAFNVESIQELEV
INELASKKGVKANVALRINPNVDAHTHHYITTGLDENKFGVPNADLEKCAAVLKKCESIE
LVGLHFHVGSQITDMTVFKSLCVKVNEWKNWFEERGTQIRVLNVGGGLGIDYKNPDGNTI
PDFEAYFDIFDRFLERTAQQEVHFELGRALVAQCGSLVSRVLYVKNGVKKNFLVLDAGMT
ELMRPALYQAYHKIENISATDSAESINYDVVGPICESSDCFGKEVPLPVSKRGDLIAIRS
AGAYGEVMASRYNLREEIRFVYSNQL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgataaatacaggtatcgcggcgaagtttgcagagaaagaaacgccgttttattattat
gatctgaatgtgttaaacaagaccctggaggctgcgcatgctgcgtcccacaaacgggga
tttcatgttcactatgcattaaaggccaattttaatgacgagttattgaaggcgattcaa
gagatcggctttggtgcggattgtgtgagtggcaatgaggtaaagaaagccattgaatgt
ggctttgattccaagaaagtcacttttgcgggagttggtaaatctgataaggaaatcaat
tatgcgctcgatcaaaatatttttgcttttaatgtggaatccattcaggagcttgaggtc
atcaatgagcttgcctcaaagaaaggtgtaaaagcaaatgtggctttacggatcaaccca
aatgtggatgcacacacccatcattatattacaacagggcttgatgaaaacaaatttggt
gtgcccaatgccgatttggaaaaatgtgcagccgtgcttaaaaaatgtgaatctattgaa
ttggttggtcttcattttcacgtaggttcacagattacggatatgaccgtattcaaaagc
ctgtgcgtgaaggtcaatgaatggaaaaactggtttgaggaacgcggtacacaaatccgt
gtattgaatgtcggtggcggattggggattgattataaaaatcctgatggaaatacaatt
cctgattttgaagcttattttgatattttcgaccgcttcctggagcgtacagcacagcaa
gaagtgcactttgaattggggcgggctttggtcgcacaatgcggaagccttgtaagccgc
gtgttgtatgtcaaaaatggtgtcaagaaaaatttcttggtattggatgctggaatgact
gaattaatgcgcccggccttgtatcaggcctatcataaaattgaaaatatcagcgcgaca
gacagcgccgaatccattaactacgatgtggttgggccaatctgtgaatcgtccgactgc
tttggtaaggaagtaccacttccggtttcaaaacgtggcgacttaattgccattcgttct
gcaggtgcttatggcgaagtgatggcctcgcgttataatctacgtgaggaaatacgcttt
gtatatagcaatcagctataa
DBGET
integrated database retrieval system