Sphingobacterium siyangense: JVX97_21825
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Entry
JVX97_21825 CDS
T08059
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssiy03036
]
JVX97_21825 (xerD)
Chromosome and associated proteins [BR:
ssiy03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
JVX97_21825 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
QRY56627
LinkDB
All DBs
Position
5118671..5119573
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AA seq
300 aa
AA seq
DB search
MDFENWSDIKKEFEQFLKFERGLSINSIDAYLNDVSKFQIYCEDNHLVLNTVTRKNIQEF
LAWLQEFNISPFTQSRLISGLKTFFSFLMIEHEFVNNPTDLLQAPRLARKLPSVLSIQEI
DQLISAIDLSSPEGERNKTIIEILYGCGLRVSELVTLKISNLFLDVEFIKVEGKGSKERL
IPIGQHAIKHLRIYLETVRPHIKIKAGNEDIVFLNRRGAALSRVMIFLIIKDLASKIGLQ
KTISPHTFRHSFASHLVEGGADLRAVQDMLGHESITTTEIYTHIDRDYLHSIITQYHPRS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaactggagtgatataaaaaaggaattcgaacaattcttaaagttcgaa
agaggcttgagcattaattcaattgatgcttacttaaatgatgtatccaaatttcagatc
tactgtgaagacaatcatttggttttaaataccgtaacgagaaagaatatacaggagttt
ttggcttggttgcaggaatttaatatttcgcccttcacacaatccaggttgatatctggc
cttaagacattctttagctttttgatgatcgagcatgaattcgtcaacaatccgaccgat
ctccttcaggcgccacgcttggcacgcaagctgcccagcgttttgagcatacaggagatc
gatcaattaatctcggcaatcgatctttcttcacccgaaggtgaacgtaataaaacgatc
atcgaaatcttatacggatgtggcctccgtgtttccgaacttgtcaccctcaaaatatca
aacctttttttagatgtagaatttatcaaagttgagggcaagggaagcaaagaacgccta
attccaattggccaacacgccattaaacaccttcgcatctacttagaaacggtcagacct
catatcaagattaaggccggaaatgaagatattgtattcctcaacagaagaggcgccgca
ttatcgcgggttatgatcttcttgatcattaaggaccttgcctcaaaaatcgggttacaa
aaaaccatcagcccacatacctttagacatagctttgcatcacacctggtggaaggcggt
gccgacttaagagctgtacaagatatgctcggtcatgaaagtattaccacgaccgaaata
tacacacacatcgatagggactatcttcattccattattacgcaatatcaccccagatct
taa
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