Sphingobacterium siyangense: JVX97_23635
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Entry
JVX97_23635 CDS
T08059
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ssiy
Sphingobacterium siyangense
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssiy02000
]
JVX97_23635
Transporters [BR:
ssiy02000
]
Other transporters
Pores ion channels [TC:
1
]
JVX97_23635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
HALZ
OMP_b-brl
TSP_3
OmpA_membrane
BfiI_DBD
DUF1598
DivIC
Motif
Other DBs
NCBI-ProteinID:
QRY56958
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All DBs
Position
5565866..5567209
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AA seq
447 aa
AA seq
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MKISLKKSGLLVAAGILSTASFAQSTKEASIEGTTPLGSATQYRTWSIGVGAGVTSLQNI
AKFNNGGYDKLDWNLGYSAYIKKQISPSFGLKATYFGGKTAGYDNSDKQTGFETKTPWSV
ALSGEFLAANTNWRFFNSFIKPYASIGVGVMNAETAAIAGGNKGEYGDSYSKIFVPADFG
LKFAVAKGINFELGYQLNWANQRFDNRYNTTPPQQYKNDLFTYAHAGLEFALGSSSKPAL
NNSNPVATLVNDYTVKYDDLKAQNDALNAKNQALQGQLDGLNNDLKDDDGDGVANKYDKC
PGTPSGVQVDGSGCPIVVKNETKVVEKVVVTEADRKVVAEAIKNLEFDLGKATIRSTSYA
TLNKVAALLIEKNFSLKLAGHTDNTGSRELNMRLSKERAESVKAYLVSQGANASRIEATG
YGPDQPIASNKNAAGRQQNRRVEFTLY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattagccttaaaaaatcaggattacttgttgcggcaggaattttatccaccgca
tcctttgcgcaaagcacaaaagaagcatcaatcgaaggcacaactccattaggttcggca
acacaatatagaacctggtctatcggtgtaggggccggtgtaacaagcttgcagaatatc
gccaagtttaacaatggtggttatgacaaactagactggaatttaggatatagtgcttat
atcaagaaacaaatctcaccatcattcggattaaaagcaacttattttggcggaaagaca
gctggttatgataacagcgacaagcaaactggattcgaaaccaaaactccttggtcagtt
gccttatctggtgagtttttagcggccaacacgaattggagatttttcaacagttttatt
aaaccttatgcatcgattggtgttggggtaatgaatgctgaaactgctgcaatcgctggt
ggtaacaaaggtgaatatggagattcctattccaaaatctttgtacctgcagattttggt
ttgaaattcgctgttgccaaaggcatcaactttgaattgggttatcaattgaattgggcg
aaccaacgatttgacaatcgttacaatacaactccgccacaacaatacaaaaatgactta
ttcacctatgcacatgccggcttagaattcgcattgggcagcagcagcaaacctgcattg
aataattcaaatcctgtcgcaacacttgtgaatgactatacagtaaaatacgatgatctg
aaagctcaaaatgatgcattgaatgctaaaaaccaagctttgcaaggtcaattggacggt
ctaaacaatgatctaaaagatgacgacggtgacggtgttgccaacaaatatgataaatgt
ccgggcacaccttcaggtgttcaggttgacggatcaggatgtccaattgttgtgaaaaac
gaaaccaaagttgttgaaaaagtagtcgttactgaagcagatcgaaaagttgttgctgaa
gcgatcaaaaacttagaattcgatttaggtaaagcaacgattcgctccacttcgtatgca
acattgaataaagttgctgcgttattgatcgagaagaattttagtttaaaactcgcaggt
cacaccgacaatacaggttcacgtgaattaaatatgcgtttatctaaagagcgtgcagag
tctgtaaaagcatatttagtatctcagggtgctaatgcctcgcgtatcgaagcaactgga
tatggtccagaccaaccaattgcatccaataaaaatgcagcgggtcgtcaacagaatcgc
cgtgttgaatttacactttattaa
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