Sphingobacterium siyangense: JVX97_27440
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Entry
JVX97_27440 CDS
T08059
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy02024
Quorum sensing
ssiy03060
Protein export
ssiy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JVX97_27440 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JVX97_27440 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JVX97_27440 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ssiy02044
]
JVX97_27440 (ffh)
Enzymes [BR:
ssiy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JVX97_27440 (ffh)
Secretion system [BR:
ssiy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JVX97_27440 (ffh)
Eukaryotic Sec-SRP protein
JVX97_27440 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
cobW
CbiA
APS_kinase
AAA_17
MMR_HSR1
ATPase
nSTAND3
DO-GTPase1
AAA_22
AAA_33
ResIII
AAA_18
AAA_24
UBQLN1
NACHT
ArsA_ATPase
TPP_enzyme_M
AAA_31
Seryl_tRNA_N
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
QRY57668
LinkDB
All DBs
Position
complement(6509695..6511035)
Genome browser
AA seq
446 aa
AA seq
DB search
MFSNLQDKLDRAFKVLKGQGSITEINVAETMKEIRKALLDADVNYKTAKTFTDDVKQKAL
GENVLTSISPGQLLTKIMNDELTALMGGSVTELETGKNPTVILIAGLNGAGKTTFSGKLA
LYLKDKKNKKPLLVAGDVYRPAAIDQLEVLAEQVGVPVYVNRESNDPIAIAKAGVEEAKR
NGNNVVIIDTAGRLAIDEPLMVEITAVKEATKPDEILFVVDSMTGQDAVNTAKTFNDRLD
FTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMDALDVFHPDRMASRILGMGDVV
SLVERAQQQFDEKQAAELQKKIRKNKFDFNDFKSQIQQIKKMGNMKDLMGMIPGVGKAMK
DIEVDDNAFKPIEAIIDSMTPFERENPDVIDQKRRLRIAKGSGTDINEVNKLLKQFGDMR
KVMKQMSNPAMAAKMMRNMPKMPGKM
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaatcttcaagataagttagatagggcctttaaagtattaaaaggacaaggt
agtattaccgagatcaacgttgcagaaacgatgaaagaaattcgcaaagcgttgttggat
gccgatgtgaattataaaactgccaaaacttttaccgacgatgttaaacaaaaagcttta
ggcgaaaatgtactgacaagtatttccccgggccaattgttgacgaagatcatgaatgat
gagttgacagctttgatgggcggatctgttacagagcttgagacaggaaaaaatccaaca
gtcattttaattgcgggtttgaatggtgctggtaaaacaacgttctcaggtaagttggcc
ttgtaccttaaagataaaaagaataaaaaaccattgttggtggctggtgacgtttaccgt
cctgcagcgattgatcaattggaagtgctcgcggaacaagtgggcgtacccgtgtatgtg
aatcgtgaatctaacgatcctattgcgattgccaaagccggtgtggaagaagcaaaacgt
aatggtaataatgttgtaattatcgatacagctggtcgtttggcgatcgatgagccatta
atggtagagattactgcagttaaagaagcgacaaaaccagacgaaatcctatttgttgtg
gattcaatgactggtcaagatgccgtgaatacggctaaaacgttcaacgaccgtctggac
tttacaggtgtagtattgactaagttggatggtgatacacgcggtggtgctgcattatcg
attaaatctgtcgttaataaacccattaagtttattggtacaggtgaaaagatggatgca
ttggatgtattccaccctgatcgtatggcatctcgtattttgggtatgggtgacgtcgta
tccttagtggaacgtgcgcagcaacagtttgacgagaagcaagctgcagagctccaaaag
aaaatccgtaagaataaattcgatttcaacgattttaaatcccagattcaacaaatcaag
aaaatgggtaatatgaaagacctcatgggaatgatccctggtgttggtaaagcaatgaaa
gatattgaagtagatgacaatgctttcaaacccattgaagcgattatcgattccatgaca
ccttttgaacgtgaaaatccagatgtcattgatcaaaaacgtcgtttacgtattgcgaaa
ggatcaggtactgatattaatgaagtgaataagttattgaaacaatttggtgatatgcgt
aaagtcatgaagcagatgtctaatccagcgatggcagctaaaatgatgcgtaatatgccc
aaaatgccaggaaaaatgtaa
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