KEGG   Sphingobacterium siyangense: JVX97_27675
Entry
JVX97_27675       CDS       T08059                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ssiy  Sphingobacterium siyangense
Pathway
ssiy00010  Glycolysis / Gluconeogenesis
ssiy00020  Citrate cycle (TCA cycle)
ssiy00260  Glycine, serine and threonine metabolism
ssiy00280  Valine, leucine and isoleucine degradation
ssiy00310  Lysine degradation
ssiy00380  Tryptophan metabolism
ssiy00620  Pyruvate metabolism
ssiy00630  Glyoxylate and dicarboxylate metabolism
ssiy00640  Propanoate metabolism
ssiy00670  One carbon pool by folate
ssiy00785  Lipoic acid metabolism
ssiy01100  Metabolic pathways
ssiy01110  Biosynthesis of secondary metabolites
ssiy01120  Microbial metabolism in diverse environments
ssiy01200  Carbon metabolism
ssiy01210  2-Oxocarboxylic acid metabolism
ssiy01240  Biosynthesis of cofactors
Module
ssiy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ssiy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ssiy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ssiy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ssiy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    JVX97_27675 (lpdA)
   00020 Citrate cycle (TCA cycle)
    JVX97_27675 (lpdA)
   00620 Pyruvate metabolism
    JVX97_27675 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    JVX97_27675 (lpdA)
   00640 Propanoate metabolism
    JVX97_27675 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JVX97_27675 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    JVX97_27675 (lpdA)
   00310 Lysine degradation
    JVX97_27675 (lpdA)
   00380 Tryptophan metabolism
    JVX97_27675 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    JVX97_27675 (lpdA)
   00670 One carbon pool by folate
    JVX97_27675 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssiy04147]
    JVX97_27675 (lpdA)
Enzymes [BR:ssiy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     JVX97_27675 (lpdA)
Exosome [BR:ssiy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   JVX97_27675 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like GIDA Thi4 NAD_binding_8 Lys_Orn_oxgnase FAD_binding_3 DAO AlaDh_PNT_C 3HCDH_N Amino_oxidase IFT46_B_C UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: QRY57714
LinkDB
Position
6563736..6565142
AA seq 468 aa
MQYDVIVIGSGPGGYVGAIRCAQLGLKTAVIEKYSTFGGTCLNVGCIPSKALLDSSEHYH
NAAHNFDAFGISLKDLKVDMAKMIARKDDVIAQNTAGITFLFKKNKIDSFQGVGSFVDKN
TIKITKADGSTEQITGKNVIIATGSKPTSLPFLPVDKKRIITSTEALNLKEIPKHLIVIG
GGVIGLELGSVYARLGSKVSVVEFAKSIIGTMDGGLGKELQRVLKKSLGMEFYLGHKVTG
ASAKGKVVKVTAEDPKGQEVTLEGDYCIVAVGRTAYSEGLGLENIGITVEERGKKIPVNA
HLETAVQGVFAIGDVITGAMLAHKAEDEGVYVAEYIAGQKPHIDYNLIPGVVYTWPEVAS
VGKTEEQLKEAGVKYKAGSFSFKASGRAKASGDTDGFVKVLADATTDEVLGVHMIGPRAA
DMIGEATVAMEYRASAEDIARICHAHPTYTEAIKEAALAATANRAIHA
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgcaatacgacgtaattgtaatcggaagtggtccaggcggatatgtaggagctatccgt
tgtgcccaattaggattaaaaacagctgttattgaaaaatatagcacatttggtggtact
tgtcttaacgttggatgtattccttcaaaagcgcttttagattcttcggagcattaccac
aatgctgcgcacaattttgatgcatttggcatcagcttgaaagatctgaaagtagacatg
gcaaagatgattgctcgtaaagacgatgtcattgcccaaaatactgctggtatcaccttc
ttatttaagaagaataaaattgacagttttcagggtgtgggttcatttgtggacaaaaac
accatcaaaataacgaaagcagatggttctacagagcagatcactggtaaaaatgtaatt
atcgcaacgggatcgaaaccgacttcattgcctttcctacctgttgataaaaaaagaatc
attacctcaaccgaagcacttaacctaaaagagattccaaaacaccttattgtcattggt
ggtggtgttataggtttggaactaggttctgtttatgctcgtttgggttcaaaagtttct
gttgttgaatttgcaaaatctatcatcggtacaatggatggtggcttaggaaaagaacta
caacgtgttttgaaaaaatcattgggtatggagttctatttaggtcataaagtgactgga
gcttctgcgaaaggtaaagttgtaaaagtaactgctgaagatccgaaaggacaagaagtc
actttagaaggcgattattgtatcgtagccgttggtcgtaccgcatattctgaaggttta
ggattagaaaatatcggcatcacagtagaagaaagaggcaagaaaatccctgttaatgcc
catctggaaacagctgtacaaggtgtatttgcaattggtgatgtgatcactggagcaatg
ttggcacacaaagctgaggacgaaggtgtatatgttgcagaatatattgcaggtcaaaaa
ccacatattgattataatttgattccaggtgttgtctatacttggcctgaagttgcttct
gttggaaagactgaagagcaacttaaagaagcaggtgtaaaatacaaagctggatcattc
tctttcaaagcttctggtcgtgcaaaagcatctggtgacacggatggttttgtaaaagta
ttggcagacgcgacaactgacgaagtattaggtgtacatatgattggtcctcgtgcagca
gatatgattggtgaggcaaccgtagctatggaataccgtgcatctgcagaggatatcgca
cgtatttgccatgcacacccaacctatactgaagcaatcaaagaggcggcgctagcagct
acagcaaacagagcaatacacgcttag

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