Sphingobacterium siyangense: JVX97_27690
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Entry
JVX97_27690 CDS
T08059
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy00010
Glycolysis / Gluconeogenesis
ssiy00020
Citrate cycle (TCA cycle)
ssiy00260
Glycine, serine and threonine metabolism
ssiy00280
Valine, leucine and isoleucine degradation
ssiy00310
Lysine degradation
ssiy00380
Tryptophan metabolism
ssiy00620
Pyruvate metabolism
ssiy00630
Glyoxylate and dicarboxylate metabolism
ssiy00640
Propanoate metabolism
ssiy00670
One carbon pool by folate
ssiy00785
Lipoic acid metabolism
ssiy01100
Metabolic pathways
ssiy01110
Biosynthesis of secondary metabolites
ssiy01120
Microbial metabolism in diverse environments
ssiy01200
Carbon metabolism
ssiy01210
2-Oxocarboxylic acid metabolism
ssiy01240
Biosynthesis of cofactors
Module
ssiy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssiy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ssiy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ssiy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JVX97_27690 (lpdA)
00020 Citrate cycle (TCA cycle)
JVX97_27690 (lpdA)
00620 Pyruvate metabolism
JVX97_27690 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
JVX97_27690 (lpdA)
00640 Propanoate metabolism
JVX97_27690 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JVX97_27690 (lpdA)
00280 Valine, leucine and isoleucine degradation
JVX97_27690 (lpdA)
00310 Lysine degradation
JVX97_27690 (lpdA)
00380 Tryptophan metabolism
JVX97_27690 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JVX97_27690 (lpdA)
00670 One carbon pool by folate
JVX97_27690 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssiy04147
]
JVX97_27690 (lpdA)
Enzymes [BR:
ssiy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JVX97_27690 (lpdA)
Exosome [BR:
ssiy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JVX97_27690 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
DAO
HI0933_like
NAD_binding_8
GIDA
Lys_Orn_oxgnase
3HCDH_N
Thi4
FAD_binding_3
Lycopene_cycl
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
QRY57717
LinkDB
All DBs
Position
6566302..6567690
Genome browser
AA seq
462 aa
AA seq
DB search
MNYDIIVIGSGPGGYVAAIRAAQLGFKTAIIERESLGGICLNWGCIPTKALLKSAQVFEY
LNHAADYGINVQGGEADFDAIVKRSRGVAEGMSKGIQFLMKKNKIDVINGTAKIKKGGKI
DVKGADGSTKEYSAKHTILATGARSRELPNLPQDGKKIIGYRQAMTLPKQPKSLVVVGSG
AIGVEFAYFYNAIGTKVTIVEFMDRIVPVEDEEISKQLEKSLKKQGITILTKSEVQSVDT
TGELSKVSIKTEKGIEVIEAEIVLSAVGIAPNIENIGLEEVGVKTDRGRVVVDDFYKTNI
EGVYAIGDIVKGQALAHVASAEGITCVEKIKGLHVEPIDYNNIPGCTYCSPEIASVGYTE
KAAKEAGYEIKVGKFPFSASGKASAAGAKDGFVKVIFDAKYGEFLGAHLIGANVTEMIAE
VVVARKLETTGHEMIKTIHPHPTMSEAIMEACADAYGEVIHL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgacatcattgtaatcggtagtggtccaggcgggtatgttgctgccattaga
gccgctcagttagggttcaaaacagcgattattgaacgcgaatcattaggcggaatctgt
ctaaactggggctgtatccctacaaaagcattattgaaaagtgctcaggtatttgaatat
ttaaaccatgccgctgattacggcatcaatgttcaaggtggtgaggctgattttgacgct
attgtcaaaagaagtcgcggggttgctgaaggaatgagtaaaggtattcagttcttgatg
aaaaagaataagatcgacgttatcaatggaactgcaaaaattaaaaaaggtggtaaaatc
gatgtgaaaggagcagacggttctactaaagaatattcggcaaaacataccatcctagcg
actggtgcacgttcacgtgaattgcctaatttacctcaagatggtaaaaaaatcatcggc
tatcgtcaagcaatgacacttcctaaacaaccaaaatctttagttgttgttggctcaggt
gctatcggtgttgagttcgcttatttctataatgcaatcggaacaaaagtaactatcgta
gaatttatggatagaatcgttcctgttgaagatgaggaaatttcaaaacaattagagaaa
agcttaaagaaacaaggtatcaccatcttaacgaaatctgaagttcaatccgttgacaca
acaggtgagttgagcaaagtttctatcaaaacagaaaaaggtattgaagttatcgaagca
gagattgtattatcggctgttggtatcgctccaaatatcgaaaatatcggcttggaagag
gttggtgtaaagactgatcgcggccgtgttgttgtagatgatttctacaaaacaaacatc
gaaggtgtatatgcgatcggtgacattgttaaaggccaagccttggctcacgttgcctca
gcagaagggatcacttgtgttgaaaaaatcaaaggtctacatgttgagcctattgactac
aataatatccctggctgtacatattgttccccagaaattgcttctgtaggttataccgaa
aaagcggcaaaagaagccggttatgaaattaaagttggtaaattcccattttcagcttca
ggaaaagcttcagctgctggtgcgaaagatggctttgttaaagttatctttgatgctaaa
tatggtgagttcctaggcgcacaccttatcggagcaaatgttacagaaatgattgcagaa
gttgttgttgcccgcaaactggaaacaacaggtcatgaaatgattaaaacgatccatcct
cacccaacaatgagtgaagcgattatggaagcttgtgctgatgcttacggtgaagtgatc
cacttgtag
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