Sphingobacterium siyangense: JVX97_28565
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Entry
JVX97_28565 CDS
T08059
Name
(GenBank) discoidin domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy00052
Galactose metabolism
ssiy00511
Other glycan degradation
ssiy00600
Sphingolipid metabolism
ssiy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
JVX97_28565
09103 Lipid metabolism
00600 Sphingolipid metabolism
JVX97_28565
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
JVX97_28565
Enzymes [BR:
ssiy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
JVX97_28565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
F5_F8_type_C
LacZ_4
F5_F8_type_C_2
Glyco_hydro_2
Glyco_hydro_2_N2
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
QRY57876
LinkDB
All DBs
Position
complement(6786905..6790951)
Genome browser
AA seq
1348 aa
AA seq
DB search
MLRNSVIFSTILASLLSLDTTVAIGQTITPSIDGFQYGAAMAPKGNEWESPQLLSLNKEL
PHASFFSFQNVESARKVLPEHSNYWLSLNGSWKFNWVKTPEERPKDFYDPSYNVGAWESV
PVPMSWNIYGIQKDGSLKYGVPIYTNQRVIFHHQVKVDDWRGGVMRTPAQDWTTYVYRNE
VGSYRRNFTVPTDWDGREVFINFDGVDSFFYLWINGKYVGFSKNSRNVASFNISPYLKKG
AENVLAVEVYRSSDASFLEDQDMFRLPGIFRDVSLTSTPKVQIRDLAAIPDLDSKYENGS
LKITSTVRNLGSKKAEGYKVVYSLYKNKLYSDENTLVDQTEASSAVPTLDVQVSNSIAAT
LNVKNPDKWSAELPYRYTLVAELKDKKNKTIETISTYVGFRKVEIKDTKAADDEFGLAGR
YYYVNGKTVKLKGVNRHETNPEHGKVVTREQMEAEVKLMKRANINHVRNSHYPEPAYWYY
LCDKYGIYLEDEANIESHEYYYGKESLSHVPEWKNAHVARNIEMVHSTINHPAVVIWSLG
NEAGPGDNFVAAYQAIKKIDTSRPVQYERNNTIVDMGSNQYPSIDWVRGAVKGTYKLKYP
FHISEYSHSMGNAVGNLIDYWEAIESTNFFMGGAIWDWIDQAMYYYDKKTGERFLAYGGD
FGDKPNDGTFVNNGLIFADMKPKPQYYEVKKVYQNAGVKAVDIQQGKIELFNKNYFKDLS
DYQVQWSLYKNGVEVKNSVGIISTTDLPKARQRKQLVLPINYAQLDAGSEYFVKVQFILN
TDRPWAAKGFVQMEEQLFVKAAENKPLISSVAQGEAPLLSKEGDLQVVKGDQFIAKFDNR
TGSIYNLTYAGKQVIRDGEGPKLDALRAPVDNDNWAYQQWFEKGLHNLKHKVLSSNSYTK
TDGTVVLAFTIESQAPYGASLLGGTSGTYTLKEHTDKPFGKDDFKFTSNQIWTIYKDGSI
ELSSSITSNNASVVLARLGYSLQLPTEFGNYSYYGRGPINNYADRKTAQFIELHKSAVKD
QFVPWPNPQNMSNNEDVRWTALTNNNGQGAIFVAKNHLATSALEYSELELTFAPHPYQLP
KSSGVHLHLDAAVTGLGGNSCGQGPPLEKDRVKAVPTSMGFIIRPIQNNDMMAKAQVATA
GDAPISLARSSNGEVSILSGNKNEPVVYSLNNAKASVYNAPFDLRTGGTVTAWYQHNEKL
KVTQQYSKIETIPMEVVFASSQETGEGDAKNLLDGDPSSIWHTMYSVTVAQYPHWVDFDA
GSSKTIKGFTFLPRQDGPNGDIKDYKIQVSKDGKNWEDVMSGSFERNKKLKTVRFEKPVK
GRYIRFTGLNSQRGDDYASGAEFAVIAE
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgttaagaaactctgttattttttcaacgattctagcctcattgctgtcgctggacact
accgttgcgatagggcaaacgattacgccatctatcgacggtttccagtatggagctgca
atggctccaaaagggaatgaatgggaatcgcctcaattattatcacttaataaggagttg
ccacatgcttcgttcttctcctttcagaacgtagaaagtgcgagaaaagtacttcccgag
cacagtaactattggctttcgctcaatggatcctggaagtttaactgggtaaagactccg
gaagagcgaccaaaggacttttatgatcctagttataatgttggtgcctgggaatctgtt
ccagtccctatgagctggaatatttatggtatacagaaggatggaagcctaaaatatggt
gtacctatttacacgaaccaacgtgtgatctttcatcatcaagtaaaggtcgatgattgg
cgcggtggagtcatgcgaacaccagcccaagattggacaacttatgtctaccgtaatgaa
gtgggatcgtaccgacgcaattttacagtacctactgattgggacggtcgtgaggtattt
atcaattttgatggtgtagactcctttttctacctgtggataaatggcaaatatgtcgga
ttttcaaaaaattcaaggaacgtcgcatctttcaatatctcaccttacttaaaaaagggc
gctgaaaatgtgttggcagttgaagtttaccgcagttcagatgcttcctttttggaagat
caggatatgtttagattgcccgggatatttcgggatgtttccctgacttcaacgccaaaa
gttcagattcgcgatctagcggctattccagacttggacagcaagtacgaaaatggttcg
ttgaaaattacaagtactgtacgcaatctagggagtaagaaagctgaagggtataaagtt
gtttattcactttataaaaataagctatacagtgacgagaatacccttgttgaccagaca
gaagcctcttctgctgtgccaactttggatgttcaggtttccaatagcatcgcagcaacg
ttgaacgttaaaaatccagataaatggtctgccgaattaccttatcggtatactttggtg
gctgaattgaaggataaaaagaacaaaacgatagagactatttctacctacgttggattt
agaaaggttgagattaaagataccaaggctgcggatgatgaatttggcttggccggacgt
tattattatgtcaatggcaagacggtgaaactgaaaggtgtcaaccgtcatgagaccaat
cctgaacatggtaaggtagtgaccagagagcagatggaagctgaggtgaaattgatgaaa
cgggcgaatatcaaccatgtaaggaattcgcactatccagaacctgcttattggtattat
ttatgcgataaatatggaatttatctcgaggatgaagccaatattgagagccatgaatat
tattatggcaaagagtctctttctcatgttcctgaatggaaaaatgcccatgtagcccgt
aatatcgagatggtgcattcgaccatcaaccatccggcagttgttatttggtctctagga
aacgaagccggtccgggtgataatttcgtggccgcctatcaggctattaaaaaaattgat
acgtcacgacctgttcaatatgagcgtaacaatacaatcgttgatatgggttccaaccaa
tatccttcgatagactgggtaagaggagctgtaaaaggtacctacaaattgaaatatcca
tttcatatttcggaatattcacattccatggggaatgctgttggtaacctaatagattat
tgggaagccatcgaatcgaccaacttttttatgggcggtgccatctgggattggattgat
caggccatgtattattatgataaaaagaccggcgaacgctttcttgcctatggtggcgac
tttggagacaaacccaatgatggaacctttgtcaataacggattgatctttgccgatatg
aaacctaagccacagtattatgaggtaaagaaagtgtaccaaaatgcgggtgtaaaagct
gttgatattcaacaagggaaaattgagcttttcaataaaaattattttaaagatctatct
gattatcaggttcaatggtcgctatataaaaatggggtagaggtgaaaaatagcgtgggt
ataatcagtacgacagatctgcccaaggcgcgccaacgtaagcaacttgtattgccgata
aattatgcgcagttagatgcgggatcggagtattttgtaaaagtacagtttattctcaat
acggatcgaccttgggcagccaaaggttttgtacaaatggaggaacaactgtttgtcaaa
gcggccgaaaataaaccgttgatttcatctgtggcacaaggagaggctccgttgctttcc
aaggaaggtgatttgcaggtggtcaagggagatcagtttattgcgaagtttgacaataga
actggttcgatatataatctaacgtatgccggtaaacaagttatccgtgatggtgaaggt
cctaaattggatgcgctacgtgctccggttgacaatgacaactgggcttaccaacaatgg
tttgaaaaaggattgcataacctgaaacataaggttttgtcttcaaatagctataccaag
acggatggaacagttgtattggcgtttacgattgaatcgcaagcaccttatggcgcatct
ctgttaggtggaacttctggaacgtatacccttaaagaacatacggataagccttttggt
aaggatgattttaaatttacaagcaatcagatctggacaatctataaggatggctctatt
gaattgtcgtcaagtattacatccaataatgcgagtgtcgtattagctcgattgggctat
tctttgcaattaccgaccgagtttggcaattacagttactatggacgtggaccgatcaac
aattatgctgaccggaagactgctcaatttattgaattgcacaaaagtgctgtaaaagat
cagtttgtgccatggcctaatccgcaaaatatgagcaacaatgaagatgtgcgttggaca
gcattaaccaacaataatggtcaaggagctatctttgttgcaaaaaatcatttagcaact
tccgctttggaatatagtgagctcgaactgacatttgcgccgcacccttatcaattgcca
aaaagttcgggtgtacatctgcatctagatgctgcggtaacaggattgggcggtaacagc
tgtggacaaggtccgccgttggaaaaagaccgtgtgaaagcggtgccaacgtctatgggc
tttattatccgtccgattcagaacaatgatatgatggcaaaggctcaggtagcgactgcc
ggtgatgcgccaatttctttggcaagaagttctaacggtgaagtttctattttatcaggt
aataagaatgaacctgttgtatacagtttgaataatgcgaaagcaagtgtctacaatgcg
ccttttgatttacgtactggtggtaccgtgactgcttggtatcagcataatgagaaatta
aaggtaacacagcaatactcaaaaatcgaaactattccaatggaagtggtgtttgcttca
agccaagagactggcgaaggagatgctaagaacctactggatggggatccttcctcgatt
tggcataccatgtattcggttaccgtagcacagtacccacattgggttgattttgatgct
ggaagtagcaaaacaattaagggcttcacttttctaccaagacaggatggaccgaatggt
gatatcaaggattataagattcaggtgagtaaagatgggaagaactgggaagatgtgatg
tccggatcttttgaacggaataaaaaattaaaaactgttcgattcgaaaagcctgtgaaa
ggacgttatatccgttttacaggacttaactcacagcgtggtgatgactatgcttctgga
gctgaatttgcggttatagctgaataa
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