Sphingobacterium siyangense: JVX97_28665
Help
Entry
JVX97_28665 CDS
T08059
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy00220
Arginine biosynthesis
ssiy00240
Pyrimidine metabolism
ssiy00250
Alanine, aspartate and glutamate metabolism
ssiy01100
Metabolic pathways
ssiy01110
Biosynthesis of secondary metabolites
ssiy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JVX97_28665 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JVX97_28665 (carB)
00220 Arginine biosynthesis
JVX97_28665 (carB)
Enzymes [BR:
ssiy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
JVX97_28665 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
GARS_A
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
RimK
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
QRY57896
LinkDB
All DBs
Position
6813779..6816598
Genome browser
AA seq
939 aa
AA seq
DB search
MPRNTSIKSVLIIGSGPIVIGQACEFDYSGSQASLSLKEEGIEVSIINSNPATIMTDKVV
ADNVYLLPLTCESIEEILQKHNIDAVLPTMGGQTALNLCIEASNLGLWEKYNVKVIGVDV
AAIEKTENREEFRQLMVDIGVGVATSKIANSFLEGKEAAQEIGYPLVIRPSYTLAGTGGG
FVHRKEDFDAALNRGLHASPTHEVLVEQAVLGWKEFELELLRDTNDNVIIICTIENFDPM
GIHTGDSITVAPGMTLSDKCYQDMRNQAILMMRSIGTFAGGCNVQFSVNPENEEIIAIEI
NPRVSRSSALASKATGYPIAKIAAKLAIGYNLDELQNQITKTTSAYFEPTLDYVIVKIPR
FNFDKFKGANKELGLQMKAVGEVMAIGRTFIEALQKACQSLETGRAGLGADGRQWRNLDE
IMDSLEHPSGDRLFHIKDAFELGVPLESIRKATRIDKWFLVQIQELVHLEQELRRYQLNN
IPRDFFMTLKQKGYSDVQIAWLLGNVTEDQVYDRRKELGINRVYKMVDTCAAEFPAQTPY
YYSTFEEENESISSDKKKIIVLGSGPNRIGQGIEFDYSCVHGLLAAKECGYEAIMVNCNP
ETVSTDFNMADKLYFEPVFWEHVREIIELEKPEGVIVQLGGQTALKMAERLEQLGVKIIG
TSFENMDLAEDRGRFSDLLKELEIPYPRYGVATSAEEALQVANEVGYPVLVRPSYVLGGQ
GMSIVINDEDLEKAVVNLLKNLPGNHILIDHFLDRAEEAESDSICDGEDVHIIGMMEHIE
PAGIHSGDSSAVLPPFGLSQAVQDKMEEYSIKLAKALNVRGLLNIQFAVKGENVYVIEAN
PRASRTVPFIAKAYDVPYINIATKVMLGVNKLKDFTIERKLKGYAIKEPVFSFNKFPEVD
KQLGPEMKSTGEAIRFIKDLQDPYFRELYNQKSMFLNAQ
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaacacttccattaagtcggttttaatcatcggatcaggtcccatcgttatc
ggtcaagcttgtgaatttgattattctggatctcaagcatctctttcattgaaagaagaa
ggtattgaagtatccatcatcaactcaaaccctgcaacaatcatgacggacaaagttgtt
gcagacaatgtctacttacttccattaacatgcgaaagtattgaagaaattttgcaaaaa
cacaacattgacgctgtacttcctaccatgggtggccagactgctttgaacttatgtatc
gaagcttctaacctaggtctttgggaaaaatacaacgtaaaagttatcggtgttgacgtt
gctgccattgaaaaaactgaaaaccgtgaagaattccgtcaattaatggttgatatcggt
gtgggcgttgcaacatccaaaattgcaaactcattccttgaaggtaaagaagcggcgcaa
gaaattggctatccgcttgttatacgtccatcttatactcttgcaggtacaggaggtgga
tttgttcacagaaaagaagattttgacgcagccttaaatagaggtttacatgcttcacca
acacacgaagttttggtagaacaagcggtattaggctggaaagaatttgaattggaatta
cttcgtgataccaacgacaatgttatcatcatctgtaccattgaaaacttcgatccaatg
ggtatccatactggagactcaatcactgttgcaccaggcatgacattgtcagacaaatgt
tatcaagacatgcgtaatcaggctattctgatgatgcgttcaattggtacatttgcaggt
ggttgtaacgttcagttctcggtaaacccagaaaacgaagaaattattgccatcgaaatc
aatccacgtgtgtcacgctcttccgctttagcatcgaaagcaactggttatccaattgcg
aagattgcagctaaattggcgattggttacaacttggatgaattgcaaaatcagatcaca
aagacaacatccgcatattttgaaccaacattagactatgtgatcgttaagatccctcgt
ttcaacttcgataaattcaaaggagcaaacaaggaattaggtctacagatgaaagcagta
ggtgaagtaatggcaatcggccgtacatttatcgaagctttacagaaagcttgtcaatca
ttggagactggccgcgctggtttaggtgctgacggtcgtcaatggagaaaccttgacgaa
atcatggacagcttagaacatccaagcggtgaccgtttattccatatcaaagatgctttc
gaattaggcgttcctttggaatctatccgtaaggcaacacgtattgacaaatggttctta
gtacagatccaagagttggtacaccttgagcaagaattacgtcgttatcaattgaataat
attccacgcgatttcttcatgaccttaaaacaaaaaggttattcagatgtgcaaattgca
tggttattaggaaatgtaacagaggatcaagtttacgatcgtcgtaaggagttaggtatc
aaccgtgtttataaaatggtcgatacttgtgctgcagaatttcctgcacaaacaccatac
tactattcgacattcgaagaagaaaacgaatcgatctcttcagataaaaagaaaatcatc
gttttaggctcaggtcctaaccgtatcggtcaaggtatcgagttcgattactcctgtgta
cacggtttattggcggctaaagaatgtggttacgaagcgattatggttaactgtaacccg
gagactgtatcgacagacttcaatatggctgacaaattatacttcgagcccgtattctgg
gagcatgtacgtgagatcatcgaattagaaaaaccagaaggtgttatcgttcagttgggt
ggacaaacggctcttaaaatggctgagcgtctagagcaacttggcgtaaaaatcatcggt
acttcatttgagaatatggacttggcagaagaccgtggccgtttctccgatctattgaaa
gaattggaaattccatatccaagatacggtgtagcaacttcagcagaagaagcattacaa
gttgcaaacgaagttggatatccagtattggttcgtccttcttacgtattgggaggacaa
ggcatgagcattgttatcaacgatgaagatttagaaaaagctgttgtcaacttgttgaaa
aaccttcctggaaaccatatcctgatcgaccacttcttggatcgtgcagaagaagctgaa
tcagattcaatctgtgatggtgaagatgtacacatcattggtatgatggaacatattgaa
cctgctggtatccactcaggagactcttcagctgtattgcctccatttggcctatcacaa
gctgttcaggataaaatggaagaatattccattaaactagcaaaagcattgaacgtaaga
ggtctattaaacattcagtttgctgtaaaaggtgaaaatgtatatgttatcgaggctaat
ccacgtgcatcacgtacagttcctttcatcgctaaagcttatgatgttccttacatcaat
attgcaactaaagttatgttgggtgttaataaattgaaagactttacaatagaacgtaaa
ctgaaaggatacgcgattaaagaacctgtattctctttcaataaattccctgaagtagac
aagcaattaggccctgagatgaaatcaactggtgaagcaattcgctttatcaaagatctt
caagatccttatttcagagaattgtacaatcaaaaatcaatgtttttgaatgcacaataa
DBGET
integrated database retrieval system
