Streptococcus suis D12 (serotype 9): SSUD12_0143
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Entry
SSUD12_0143 CDS
T02021
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssk
Streptococcus suis D12 (serotype 9)
Pathway
ssk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSUD12_0143 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssk03019
]
SSUD12_0143 (groEL)
03110 Chaperones and folding catalysts [BR:
ssk03110
]
SSUD12_0143 (groEL)
03029 Mitochondrial biogenesis [BR:
ssk03029
]
SSUD12_0143 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssk04147
]
SSUD12_0143 (groEL)
Enzymes [BR:
ssk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SSUD12_0143 (groEL)
Messenger RNA biogenesis [BR:
ssk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SSUD12_0143 (groEL)
Chaperones and folding catalysts [BR:
ssk03110
]
Heat shock proteins
HSP60 / Chaperonin
SSUD12_0143 (groEL)
Mitochondrial biogenesis [BR:
ssk03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SSUD12_0143 (groEL)
Exosome [BR:
ssk04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SSUD12_0143 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SSUD12_0143 (groEL)
Exosomal proteins of breast cancer cells
SSUD12_0143 (groEL)
Exosomal proteins of colorectal cancer cells
SSUD12_0143 (groEL)
Exosomal proteins of bladder cancer cells
SSUD12_0143 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4142
Motif
Other DBs
NCBI-ProteinID:
AER18490
UniProt:
G7SD79
LinkDB
All DBs
Position
139775..141397
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AA seq
540 aa
AA seq
DB search
MAKEIKFAADARESMVRGVDILADTVKVTLGPKGRNVVLEKAYGSPLITNDGVTIAKEIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIE
AAVATAVEALKAQASPVSNKAEIAQVAAVSSRSEKVGEYISEAMERVGTDGVITIEESRG
METELDVVEGMQFDRGYLSQYMVTDNEKMVAELENPFILITDKKISHIQDILPLLESILQ
TNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVIT
EDLGLDLKDATIEALGQAAKVVVDKDGTTIVEGAGNPEAIANRVAVIKSQIEVTTSEFDR
EKLQERLAKLSGGVAVIKVGAATETELKEMKLRIEDALNATRAAVEEGIVAGGGTALVNV
IDSVAKLELKGDDETGRNIVLRALEEPVRQIAYNAGYEGSVVIDKLKNSELGTGFNAATG
EWVNMMDAGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPAAPAMPQGMDGMGMGY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaaatttgcagcagatgcacgtgaaagcatggtccgtggtgtcgat
attttggcggatactgtcaaagtaaccttgggaccaaaaggtcgtaatgttgtcttggaa
aaggcttatggctcaccactcattacaaacgacggtgtgactattgctaaagaaatcgag
ttggaagaccattttgaaaatatgggtgctaagttggtatccgaagtggcttcaaaaacc
aatgatattgctggtgacgggacaacaactgctactgtcttgactcaggctattgttcgt
gaaggcttgaaaaacgtaacggcaggtgccaacccaatcggaattcgtcgcgggattgaa
gctgcggttgcgacggcagttgaagcattgaaagcacaagcaagtcctgtatccaataaa
gctgaaattgctcaggtagcagccgtgtcttcacgttctgaaaaagttggtgagtacatt
tcagaagccatggagcgcgtgggaacagacggcgttattactattgaagaatctcgcggt
atggaaacagaattggatgtggttgaaggtatgcaattcgaccgtggttatctgtcacaa
tacatggtaacagataatgagaagatggttgcggagcttgaaaatccatttatcttgatt
acagataagaagatttctcatatccaagatattttgccactcttggaaagcattcttcag
accaaccgtccgcttttgattattgctgacgatgtggatggcgaggctcttcctaccctt
gttctcaacaagattcgtggtacgttcaacgttgttgctgttaaggcgccaggctttggg
gaccgtcgtaaagctatgttggaagacattgctatcttgacaggtggtacagtgattaca
gaagaccttggtttggacttgaaagatgcaaccattgaagcacttggtcaggctgccaag
gttgtggttgacaaagatggtacaaccattgttgaaggtgctggcaatcctgaagccatt
gccaaccgtgtggctgttatcaagtcacaaattgaggtaaccacttcagaatttgaccgt
gaaaaattgcaagagcgcttggctaaattgtcaggtggtgtcgcagttatcaaagtcggt
gccgcgacggaaactgagttgaaagaaatgaaactccgtatcgaagatgccctcaacgca
acacgtgccgcagttgaagaaggaatcgttgccggtggtggtacagcccttgtcaatgtt
atcgatagcgtagcgaaattggagttgaaaggcgacgatgaaacaggacgcaatattgtc
cttcgtgccttggaagaaccagttcgtcagattgcctataacgcaggctatgaaggttca
gttgtcattgataaattgaagaattctgagcttggaacaggctttaacgctgcaacaggc
gaatgggtcaacatgatggatgcaggtattattgaccctgttaaggtgactcgttcggcc
cttcaaaacgcagcttccgtagccagcttgattttgacgacagaagcagtcgttgccaac
aaaccagaaccagctgctccagctatgccacaaggtatggatggaatgggtatgggctat
tag
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integrated database retrieval system
