Streptococcus suis D12 (serotype 9): SSUD12_0220
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Entry
SSUD12_0220 CDS
T02021
Name
(GenBank) Transcriptional activator
KO
K20391
HTH-type transcriptional regulator, pleiotropic regulator of extracellular virulence genes
Organism
ssk
Streptococcus suis D12 (serotype 9)
Pathway
ssk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SSUD12_0220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssk03000
]
SSUD12_0220
Transcription factors [BR:
ssk03000
]
Prokaryotic type
Helix-turn-helix
Other families
SSUD12_0220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
RNPP_C
Pou
BIG2_C
HTH_19
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AER18561
LinkDB
All DBs
Position
228890..229753
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AA seq
287 aa
AA seq
DB search
MKMILSKRFKNRRKELGFTQKELAEGICEQSLISRVEKLGVAPTSDILFALSQRLQVSMD
YFFDESVSDKAPDITVFKRLVDKALFTRSYDQLAYLVEAEKQKEAVHSQESSEYLTYLAC
IVDFHHYHKEDTAIVRMEELSHRISKKSSFYLDVYSSLANFYALTSRDEDLESLYEEISE
KLSHLDITDTDRFHKYIKIRYNHAHYLFKRKRQPQAIDELTDLIEILRDKKSCYLLADTL
CLIANVGEGFLSKDEILSYYREAECLFKFFGPQNSYLSLKEYLSKDI
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgattcttagtaaacgttttaaaaatagaagaaaggagcttggctttactcaa
aaggagcttgcagagggaatttgtgagcagagtttgattagtcgagttgaaaaattagga
gttgctcctacatcggatatattatttgccttatcacaacgcttacaggtgtctatggac
tatttttttgatgaaagtgtatcagataaagcacctgatattacggtatttaaacgattg
gtggacaaagctctgttcactcgttcctatgatcaactggcttatcttgtagaggcagag
aagcagaaagaagctgttcattcgcaggaaagcagtgaatatttaacttatctggcttgt
atagtggacttccatcattatcataaggaagatactgcaattgtacgtatggaagaactt
agtcatcgaatcagtaagaaatctagtttttatctggatgtatacagtagtttggctaat
ttttatgccttgacttcccgagatgaggatctagaaagtttgtatgaggagatttcagaa
aagcttagtcatttggatataacagatacagatcgttttcataagtatatcaagattcgc
tacaatcacgctcactatctttttaaaagaaagagacagccacaggcaattgatgaattg
acagacttaatcgaaatcttgcgagacaagaagagttgttatcttttggctgacacgctt
tgtttaattgcaaatgtaggagagggatttttgtcaaaggatgaaattctctcatactat
agagaagcggaatgcctattcaaattttttggtccgcaaaatagttatctcagtttaaaa
gaatatctatcaaaagatatttaa
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