Streptococcus suis D12 (serotype 9): SSUD12_0398
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Entry
SSUD12_0398 CDS
T02021
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ssk
Streptococcus suis D12 (serotype 9)
Pathway
ssk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSUD12_0398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssk03019
]
SSUD12_0398
Messenger RNA biogenesis [BR:
ssk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SSUD12_0398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DivIVA
ATP-synt_B
KH_KhpA-B
dUTPase
LapA_dom
Motif
Other DBs
NCBI-ProteinID:
AER18729
UniProt:
G7SF88
LinkDB
All DBs
Position
408272..409885
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AA seq
537 aa
AA seq
DB search
MNIITVVVTLVSALIGLVLGYFAISLKMKSAKETAELTLLNAEQEASNVRGRAEEQAEVI
LKTAERDRQTLKKELLLEAKEEARKYREEIAEEFKSERQELKQIESRLTERATSLDRKDD
NLTNKEKTLEQKEQSLTDKAKHIDEREQEVVKLEEQKALELERVAALSQEEAKEIIFTDT
RDKLTHEIATRIKEAEREVKERSDKMAKDLLAQAMQRISGEYVAEQTITSVHLPDDAMKG
RIIGREGRNIRTFESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTMETLLQDGRIHPAR
IEELVEKHRVEMDNRIREYGEAAAYEVGAPNLHPDLIKIMGRLHFRTSYGQNVLRHSIEV
AKLAGVLAAELGENVNLARRAGFLHDVGKAIDREVDGSHVEIGTELAKKYKENPIVINAI
ASHHGDVEATSTIAVIVAAADALSAARPGSRRESMEAYIKRLQDLEEIANSFEGIKQSYA
IQAGREIRIIVHPNKVTDDQITILAHDVREKIENNLDYPGNIKITVIRETRATDVAK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcattacagtagtagtgacacttgtttctgctctcattggtttagtattaggt
tactttgccatttctttgaagatgaaatctgcaaaagaaactgcagaattgacactttta
aacgcagaacaagaagctagtaatgttcgtggtcgagccgaagagcaagctgaggttatt
ctaaaaacagctgagcgcgatcgccagaccttgaaaaaagaattactcttggaagctaag
gaagaagctcgtaagtaccgagaagaaattgcagaagaatttaagtcagaacgtcaagag
ttgaagcaaatcgaatcacgcttgacagagcgtgcgaccagcttggaccgcaaagacgat
aatttgaccaacaaggaaaagactttggaacaaaaggaacaaagtctgaccgataaagct
aagcacattgatgagcgtgaacaagaagttgtaaaactcgaagaacaaaaagctttggag
ttagaacgagtggcggccctcagtcaagaagaggcgaaggaaatcatctttaccgataca
cgtgataaactgacgcatgaaattgcgactcgtatcaaggaagcagagcgtgaagtaaaa
gaacgttctgacaagatggcaaaggacttgttagcccaagcgatgcaacgtatatcaggt
gaatatgtggctgagcagacgattacatcggttcatttaccggatgatgcgatgaaggga
cggattattggacgtgagggtcgaaatattcgtacctttgaaagtctcacaggtatcgat
gttatcattgatgatacaccagaagtggttgttctatcaggttttgatccgattcgccgt
gagattgcccgtatgaccatggagaccttgcttcaagatggtcgtattcatccagctcgt
attgaggagttggttgagaaacaccgtgtagagatggataatcgtattcgtgagtatggg
gaagctgctgcttatgaagttggggcaccaaaccttcatccagacttaattaaaatcatg
ggacgtttgcatttccgtacctcttatggacaaaatgttcttcgccactcaatcgaagtt
gctaaattagcaggtgtacttgctgctgaattgggcgagaatgtgaatttggcgcgtcga
gctggtttcctacatgacgttggtaaagctattgaccgtgaggtggatggaagccacgtt
gaaatcggtacagaattggctaagaaatataaagagaatccaattgttatcaatgcgatt
gctagtcaccatggcgatgtagaagcgacaagtacgattgcagtcattgtggctgcggca
gatgctctgagcgctgctcgtccaggttcgcgtcgtgaatctatggaagcctacatcaaa
cgtctgcaagacttggaagaaatcgctaacagttttgaagggattaaacaatcctatgct
attcaggctggtcgtgaaattcggattatcgttcatcctaacaaggtcactgatgatcag
attaccatcttggcccatgatgttcgtgagaaaattgaaaataatctggattatccagga
aatatcaaaatcacagttatccgtgaaacaagagcaacagatgttgctaagtaa
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integrated database retrieval system
