Streptococcus suis D12 (serotype 9): SSUD12_0550
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Entry
SSUD12_0550 CDS
T02021
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ssk
Streptococcus suis D12 (serotype 9)
Pathway
ssk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SSUD12_0550 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssk03400
]
SSUD12_0550 (fpg)
Enzymes [BR:
ssk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SSUD12_0550 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SSUD12_0550 (fpg)
DNA repair and recombination proteins [BR:
ssk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SSUD12_0550 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Zn_ribbon_6
Auto_anti-p27
DUF4862
Motif
Other DBs
NCBI-ProteinID:
AER18873
UniProt:
G7SFG5
LinkDB
All DBs
Position
554469..555296
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETVRRGLNRLVKGKVIERVKVTYAPMIKTGVDAFCQNLIGQEILDVDRRGKYL
LIYLTDHVLISHLRMEGKYNFFPDQVPANKHFHAFFTFTDGSTLVYQDVRKFGTMELLGK
ADVEAYFLSRKIGPEPTEEDFDLEAFAAKLAKSKKPIKSHLLDQSLVAGLGNIYVDEVLF
KAQVHPAQASNQLSAEQVADLRQATIEVLQLGIEKGGSTIRTYKNALGMDGTMQDYLQVY
GKTGQACPRCQTEIVKIQLGGRGTHFCPTCQVKHG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttccagaggttgagacggttcgtcgtgggttgaatcggttggtcaaggga
aaggttatcgaaagggtcaaggtgacctatgctcctatgattaagactggtgtggatgcc
ttctgtcagaacttgattggtcaggagattttagatgtggatcgtcgtggtaagtatctc
ttgatttacctgacggaccatgtcctcatttcccacttgcgaatggaaggtaaatacaat
ttctttcctgaccaggtgcctgccaacaagcatttccatgccttttttacttttacagat
ggatcgaccttggtttatcaggatgtccgcaagtttggcacaatggaactgctgggcaag
gcagatgtggaagcctactttctcagtcggaaaatcggtcctgagccgacggaggaagat
tttgacttggaagcctttgctgctaagttggccaagtcgaaaaagcccattaagtcgcat
cttttggaccagtctttagtggctggtttgggcaatatctatgtcgatgaggtcttgttc
aaggcacaagttcatcctgctcaagcaagtaatcagctatcggctgagcaggtggcagac
ctccgtcaagctactatagaagttctgcaactgggtatcgaaaaaggtggctcaaccatt
cggacctataagaatgccttgggcatggacgggaccatgcaggattatttacaagtttat
ggaaagacagggcaggcctgtccccgttgccagacagagattgtcaaaatccagctgggt
ggtcgggggacgcatttctgtcccacgtgtcaggtgaagcatggctaa
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integrated database retrieval system
