Streptococcus suis D12 (serotype 9): SSUD12_1065
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Entry
SSUD12_1065 CDS
T02021
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssk
Streptococcus suis D12 (serotype 9)
Brite
KEGG Orthology (KO) [BR:
ssk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssk03400
]
SSUD12_1065
Enzymes [BR:
ssk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SSUD12_1065
DNA repair and recombination proteins [BR:
ssk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SSUD12_1065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Phage_integr_3
UvrD_C
SVS_QK
Motif
Other DBs
NCBI-ProteinID:
AER19369
UniProt:
G7SH37
LinkDB
All DBs
Position
complement(1079790..1083056)
Genome browser
AA seq
1088 aa
AA seq
DB search
MKLVYTDIRNPLTQYLTDIAAEFAKEGKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIV
TRFGQLARYLMIDRKEAGQPLDDVGLAMIFFRVLSQFEDGDLKVYGRLQTDFGFINQLVA
LYKELQRANMSILDLEAMESPDKQADLVKIFLAGTDILSKEGFEHQSKLAQLTSLVETGQ
LDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAVQATYAEGNVYQAN
VDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEV
VNQKEEVEQVATAIRQHIHQGARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEM
SHHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYASISQKELDLFESYILFADMKGQVAF
SRAFSVNGRADYDAEVIKEKRLVYDLAVLEPLRAKIMEPLNQLFKAGPQSGTALLEKFMA
FLEAIDLPKNMEKMSRNLSEVEQEKEEQVWKSFTHLLENFHQIFGKEKLKMDDFLAILQA
GMQASHYRTVPATVDVVNVKSYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEK
VNLVSASSSRFDLVSRENIKKNHAAMMSLLNAATEQLVISTPQIYNEGEDSLSPYIKILQ
KMGLKSEERGRIKTLSPQDIGHYKSLLSRLIESERPSLDNEEWEGQRAFWTVLVRHLKKK
LESQGIEIPTITGEITSKQLSDETLAALYPEDMPLNLSASSLTNFYNNQYLYFVRNVLRL
REQESIHPTAFQHGLFLHRIFERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADA
RYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDKALVFDLQNGKSVHVNGTIDRLDT
LQINQAVGVVDYKSSDQSFSIGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAILLKHNQ
ALYKQAAMDILAGRFAINPYTKDGRSVAGEQLKSITGFEADRHMGMARRLVKEAKRQDWM
ERMKGGQD
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtctatacagatattcgcaatcctctgacgcagtatttaacggatatcgca
gcagaatttgctaaggaaggtaagcgagttttttatatcgctccgaactctctatccttt
gagatggagcgcaaggtcttggaatacctgcctgaacaggcaacttttgatattatcgtg
acccgttttgggcaattagcccgctatttgatgattgataggaaagaagcaggtcaaccg
ctggatgatgttggtcttgccatgattttctttcgtgttctatcgcaatttgaagatggc
gacttgaaagtctatggtcgtttgcagacagattttggtttcattaaccagctagttgct
ttatacaaagaattgcaacgggcaaatatgtctattttggacttggaagccatggagtca
ccagataagcaggctgatttggtaaagatttttctggctggaacagacattttgtccaaa
gaaggctttgagcatcagtctaagttagcacagctgactagcttggtggaaactggtcag
ttggatgagcagttgaagaacattgtgctggtggtagatggattttctcgtttttcggca
gaagaagaagctttagtaagtgctttaaatgaacgggtgtcggaaatcctgattggtgta
tatgccagcaagaaagctgtgcaagccacctatgcggaaggcaatgtctatcaagccaac
gttgactttttacgtcagttatcagcgcagttccagactaaggctacttatattggtcaa
gagccagtcttggacagtattggtaaattttcaaagaatatggaagcctattatgactac
agcgggaccatgatagacttgactccagcagatcaagaaaaaatacagctatgggaagtc
gttaaccaaaaagaagaggtggagcaggtagcaacggcaattcgccaacacatacaccaa
ggagctcgctataaagacatcttgttgctcttgggtgatgtggatagctacaagttgcag
attggcaagatttttgacaagtatgacattccttactatttcggtaaggcagaggagatg
agtcatcatccgttggtccattttgtggagtccttggagcgcttgcgtcgctatcgtttt
cgtgcggaagacctgctcaatctcctcaaatctggtttgtacgccagcatttcccaaaag
gagctggacctatttgagtcttacatcctctttgcggatatgaaggggcaggttgctttt
tcgagggctttttcggtcaatggcagagcagactatgatgctgaagtcatcaaggagaag
cgactggtctatgatttggctgtcttggaacccctacgggctaagattatggagcctttg
aaccagctgtttaaggctggaccacaatctggaactgccttgcttgagaaatttatggca
tttttggaggcaattgatcttcctaaaaatatggaaaaaatgtctcgaaatttgagtgaa
gtagagcaagaaaaagaagagcaggtctggaaaagttttacccatcttctcgagaatttt
catcagattttcggaaaagaaaaattgaaaatggatgattttctggctattttacaggct
ggaatgcaggccagccactatcgtaccgttcctgcaacagttgatgtggtcaatgtcaaa
tcctatgatttgatcgagccgcacactgctaagtatgtttatgctatcggaatgggtcag
tccaattttccaaaagttgccaagaataccagtctattgactgaagaagagatggaaaaa
gttaatcttgtctcggctagttcctcacgtttcgatttggtcagccgagagaatatcaag
aagaaccatgctgccatgatgtctctgcttaatgctgcgacggaacagttagtcatttca
actcctcagatttataacgaaggcgaagacagtctctccccatatatcaagattctccaa
aaaatggggttgaaatccgaagaacgtggtcggattaaaacacttagtccgcaagacatc
ggtcactacaagagtctcttatcccgtttgattgagtcggaaagaccatctcttgataat
gaagaatgggaagggcagagggccttctggacagtcttggttcgccatttgaagaagaaa
ttggagtcgcaaggcattgaaattccgaccattactggcgaaattacttctaaacaactt
tcagatgaaaccttggctgctttatatccagaggatatgccactcaatctttctgcatcc
agcttgaccaatttttacaacaaccaatatctttactttgtccgtaatgttcttcgcttg
cgggaacaggaatccatccatccgactgcctttcagcatggtttgttcttgcatcggatt
tttgaacgagtggtcatggaccaatctgagctagattttgatcaaaaagtggacaaggcc
atcctgcgtacacgtgacgaggcagaatttgctatgttttataaccaggatgcggacgct
cgctatacggaggaggtgctggataagattgctcgctccagtgcgaccattttgcgggat
aatgatttggttgaaattgatggtcaggaaaagagtttccgtcaggataaggcgctagtt
tttgaccttcagaatggcaagagtgtgcatgtaaatggtaccattgaccgcttggatacc
ttacaaatcaatcaggctgtcggtgttgtagattacaagtccagtgaccaaagcttttcg
attggggatttttacaatggtcttaaacctcagttggtaacctacttggcagccttacaa
gagctggatgaaaccaaggataaacctgtttttggagccatgtatttgcatttgcaggat
ccgattatcaaattaaaggatacgaagaatttagaacagctagaaggagctgccaatact
agcttggtttacaaggggcttttcttgaaggaggaaagtctggggctcaatcatttttat
cagactcgcaaccaactctatacggaagatgagtttgcgattttattgaaacacaaccaa
gcactctacaaacaagctgccatggacattctggctggtcgctttgctattaatccttat
accaaagatggccgttcggtggcaggtgagcagctgaagtcaatcactggttttgaggcg
gatcggcacatgggcatggcacggcggttagtcaaagaggccaagcgtcaagattggatg
gaacgaatgaaaggaggtcaggactaa
DBGET
integrated database retrieval system
