Streptococcus suis D12 (serotype 9): SSUD12_1529
Help
Entry
SSUD12_1529 CDS
T02021
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ssk
Streptococcus suis D12 (serotype 9)
Pathway
ssk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSUD12_1529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssk03019
]
SSUD12_1529
03009 Ribosome biogenesis [BR:
ssk03009
]
SSUD12_1529
Enzymes [BR:
ssk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SSUD12_1529
Messenger RNA biogenesis [BR:
ssk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SSUD12_1529
Ribosome biogenesis [BR:
ssk03009
]
Prokaryotic type
rRNA helicases
SSUD12_1529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AER19805
UniProt:
G7SI78
LinkDB
All DBs
Position
complement(1536144..1537724)
Genome browser
AA seq
526 aa
AA seq
DB search
MKFTDLQLSEDILLAVEKAGFETPSPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIDTNNQAIQALIIAPTRELAVQSQEELFKFGREKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLDGVETLILDEADEMLNMGFLDDIETIIERVPESRQTLLF
SATMPEPIKRIGVKFMKEPEHVKIAAKELTNVNVDQYYLRVKEHEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVSPNEMGYLAIIEELTKK
RMKGLKPATAEEAFEAKKKVALKKIERDFADDTIRGNFDKFKKDAVKLAAEFTPEELALY
VLSLTVQDPDSLPEVEIAREKPLPFKYAPGQAKGKGGRGGRDRDRGGRRDGDRNRDRGGR
RGDRNDRNRRDDKFKRDNHRQDNKKPHQRTSSEKKTGFVIRNKGER
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagatttacaattatcagaagatattttgcttgccgttgagaaggctggt
tttgaaacgccgtcaccaatccaggagcagaccattccgcttgctctggaaggaaaagat
gtgattggtcaagcgcagacggggacagggaaaactgcagcctttggtttgccaactctc
aacaaaattgataccaacaatcaagcaattcaagccctaattattgccccaacgcgtgag
ttggcggtgcagagtcaagaagaacttttcaaatttggtcgtgaaaagggtgtgaaagtc
cgctctgtttacggtggctcaagcattgaaaagcaaatcaaggcccttcgttcaggtgct
cacatcgttgttggtacaccaggtcgcctcttggacttgatcaaacgcaaggccctcaaa
cttgacggtgttgaaactctcattcttgacgaggcagatgaaatgctcaacatgggcttc
ttggatgatattgaaacgatcatcgaacgtgtaccagagagccgtcaaacccttctgttt
tctgcaaccatgccagagccaatcaagcgtattggtgtcaagttcatgaaagaacctgag
cacgttaagattgcagcaaaggaattgactaatgtcaatgttgaccaatattatcttcgt
gtcaaagaacatgaaaaattcgacaccatgactcgtcttatggatgttgaccagccagaa
ttgtctattgtctttggtcgtaccaaacgccgtgtcgatgaattgactcgtggtttgaaa
ttgcgtggtttccgtgcagaaggtatccacggagatttggaccagaataagcgcctccgt
gtcatccgtgactttaaaaatgaccagattgatgtccttgttgcgacggacgttgcggcc
cgtggtttggatatttcaggtgtaacacatgtctataactacgatattccacaggatcca
gaaagttatgttcaccgtatcggtcgtacaggtcgtgcgggtcaatcaggtcagtctatt
acctttgtttcgccaaacgagatgggctacttggccatcatcgaagagttgactaagaag
cgtatgaagggactcaagccagcgacagctgaagaggcctttgaagccaagaaaaaagtt
gccttgaagaagattgaacgtgactttgcagacgataccattcgtggaaactttgataaa
tttaaaaaagacgcagtcaaattggcagctgaatttacaccagaagagcttgcactctac
gtactcagtctgaccgtacaagatccagatagcttgccagaagtggaaatcgcgcgtgaa
aaaccattgccattcaagtatgctcctggtcaagccaagggcaaggggggacgtggtggt
cgcgaccgtgatcgcggtggtcgtcgtgatggagaccgcaaccgagaccgcggaggacgc
cgtggtgatcgtaatgaccgcaaccgtcgcgatgataagtttaaacgcgacaaccaccgt
caggacaacaaaaaaccacaccaacgcacatcaagtgaaaagaaaacaggctttgttatc
cgcaataaaggggagagataa
DBGET
integrated database retrieval system
