Streptococcus suis D12 (serotype 9): SSUD12_1942
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Entry
SSUD12_1942 CDS
T02021
Symbol
clpC
Name
(GenBank) stress response-related Clp ATPase
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ssk
Streptococcus suis D12 (serotype 9)
Brite
KEGG Orthology (KO) [BR:
ssk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssk03110
]
SSUD12_1942 (clpC)
Chaperones and folding catalysts [BR:
ssk03110
]
Heat shock proteins
HSP100
SSUD12_1942 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
ClpB_D2-small
AAA_lid_9
AAA
AAA_5
Clp_N
AAA_16
Sigma54_activat
AAA_22
ATPase_2
AAA_14
NBD_SMAX1
IstB_IS21
nSTAND3
NACHT
Mg_chelatase
AAA_24
AAA_25
AAA_18
AAA_7
TIP49
TniB
DNA_pol3_delta2
Torsin
AAA_28
DUF87
Motif
Other DBs
NCBI-ProteinID:
AER20207
UniProt:
G7SIN9
LinkDB
All DBs
Position
complement(1939921..1942374)
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AA seq
817 aa
AA seq
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MKISTGLQRVFEDAQLVAQRYACDYLETWHVLLSFVINHDTVAGAVLAEYPISISDYEHA
TFVVTDKVYREELDSFRILPSSKRLDETASFAKKIAEVVKAKELGTEHLFMAMLLDKRST
ASQILDKVGFYFEDSDDKFRFLDLRKNLEARAGFTKEDLKAIRSVMKGGKAKPTNMGQMM
GMPPAPQSGGLEDYTRDLTALAREGKIEPVIGRDAEIARMIQILSRKTKNNPVLVGDAGV
GKTALALGLAQRVAAGDVPVSLAKMRVLELDLMNVIAGTRFRGDFEERMNNIINDIEEDG
QVILFIDELHTIMGSGSGIDSTLDAANILKPALARGTLRTVGATTQTEYQKHIEKDAALV
RRFAKVTIEEPTVEDSIAILTGLKGTFEKYHRVRIGQAAVETAVTYAKRYLTSKNLPDSA
IDLLDEASATVQNRVKGQAEETGLTSIDKALMDKKYKTVSKLLIKTKEDAEASQNYDLEV
TEEDVLETLSRLSGIPVAKLSQSDTKKYLNLEAELHKRVIGQEEAISAVSRAIRRNQSGI
RTGRRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPP
GYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSN
TIIIMTSNLGATALRDDKTVGFGALDLSKDHKEVEKRIFEELKKAYRPEFINRIDEKVVF
HSLTETHMQDVVKVMIKPLLAVTAEKGITLKLQPSALKLLAKQGYDPEMGARPLRRLLQT
KLEDPLAEMLLRGDLTTGSTLKVGVKGEELKFDVVKG
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttcaactggtttacagcgggtttttgaagatgcccagttagtggcccaacgt
tatgcctgtgattacttggaaacctggcatgttctcttgtctttcgttatcaaccatgat
acagtcgctggcgctgttttggcagaatatcctatttcaatttctgactatgaacatgca
acttttgttgtgaccgacaaggtctatcgtgaagagttggatagttttcgtattttacca
tcttctaaacgtttggatgaaacagctagttttgccaagaaaattgcagaagtcgtcaag
gctaaggagctgggaacggaacatttgtttatggctatgttgttggacaagcggtcaaca
gctagtcagattttggacaaggtaggtttttattttgaagactcagatgataagtttcgt
ttcttggatttgcgtaaaaacttggaggcacgtgcgggatttaccaaagaggaccttaaa
gctatccgcagtgtgatgaagggtggcaaagccaaacctaccaatatgggacagatgatg
ggaatgcccccagcacctcaaagtggtggattagaagactacactcgtgatttgacagct
ttggcgcgtgaagggaagattgaacctgtcatcggtcgagacgctgagattgcacggatg
atccaaattctatcacgtaaaaccaagaacaacccagttctagttggtgatgctggtgtc
ggaaaaactgcgcttgctttgggtcttgctcaacgtgttgctgcaggtgatgtccctgtc
agcttagctaagatgcgggttttggaacttgacttgatgaacgttatcgctggaactcgt
ttccgtggtgatttcgaagagcggatgaataatatcatcaacgacatcgaggaagatggt
caggtcatccttttcatcgatgagttgcataccattatgggttctggctcggggattgat
tcgaccttggatgcagccaatatcctcaaaccagctcttgctcgtggcaccctccgtacg
gtcggagcgacgactcagacagagtaccaaaagcatattgagaaagacgcagccctggtt
cgtcgttttgccaaagtgaccattgaagagccgacagtggaagatagcattgccattttg
actggtttaaaaggtacttttgaaaaataccacagggtccgtattggacaagcagctgta
gagactgctgtgacctacgctaagcggtatttgaccagtaaaaacctgccagattctgcc
attgatctgctggatgaagccagtgcaacggtacaaaatcgagtgaaagggcaggctgag
gaaacaggactgacgagcatagacaaggccttgatggataaaaaatataagactgtcagc
aagcttttgattaaaacgaaagaagatgccgaggctagtcaaaactatgaccttgaagta
acagaagaagatgttttagaaacacttagccgcttgtcaggtatcccagtagccaagctt
agccaatcagatactaagaagtatctgaatctggaagcagaattgcataagcgtgtgatt
gggcaggaagaagctatttctgctgttagcagagctattcgtcgtaatcagtcagggatt
cgtacaggtcgcagaccgattggttcctttatgttcttgggaccgactggtgtcggtaag
acagagcttgctaaagccttggcggaggttctctttgatgatgaatctgctcttatccgt
tttgatatgtctgagtatatggagaaatttgcggccagccgtctcaatggagcgcctccg
ggctacgtgggctatgaagaaggtggcgaattgacagaaaaagttcgtaataaaccttat
tctgttcttctttttgatgaggttgaaaaggctcatccagatattttcaatgttctcttg
caggtcttggatgatggtgtcttgacggacagtaagggacgtaaggttgatttttcaaat
actattattatcatgacgtcaaaccttggagcaacagcccttcgtgatgataagacagtt
ggttttggtgcccttgatttatctaaggaccacaaggaagtggagaaacgcatttttgag
gaattgaaaaaagcctatcgtccagaatttatcaaccgcattgacgagaaagttgtcttc
catagcctaacggaaactcatatgcaggatgttgtcaaggtcatgattaaacctttgttg
gctgtaacagctgagaaaggaattactcttaaactgcaaccgtcagcccttaagttattg
gctaaacaaggttatgacccagaaatgggggctcgtcctcttcgtagactcttgcagacc
aagttggaagatccgttggcagaaatgttactccgtggtgacttgactactggttcgacc
ttgaaggttggggtcaagggtgaagagctcaagtttgatgtggtaaagggataa
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integrated database retrieval system
