Sclerotinia sclerotiorum: SS1G_00052
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Entry
SS1G_00052 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssl04121
]
SS1G_00052
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssl04147
]
SS1G_00052
Ubiquitin system [BR:
ssl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
SS1G_00052
Exosome [BR:
ssl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SS1G_00052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP120
HEAT_2
RTP1_C1
Cnd1
Motif
Other DBs
NCBI-GeneID:
5494477
NCBI-ProteinID:
XP_001597966
UniProt:
A0A1D9PZV4
A7E430
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MASNSITTNPTSQTVASLLPKLHDADPDYRFMSLNDLFQVLTIGKADLLHNDYSTAAKTV
DGIIRTLDDQNGEVQNLAIKCLGPLVTKLPSNIIAPLIERLSTLTTENSVDNSIPAMALR
TVVITLPRPVSGVAPSKEVLEAYSAISRVLIPRLVGRIVTSTSTRGQNLPNPPPGMLDPS
TNSEIDSDAVDVLIEVARCFGPLLQHAEVEALQNLVVNILETEKASSVVKKRAVVAVSLL
AMHLTDSDLSGFVSHIIESLRNPHLTPVQRRLYITILGSMARSIPARFGPYLKTLAPFVL
SALSEQELQDQLENAAEDGESNPEIDDVRESALVALDGFLASCGTEMRIHTEETIAAALR
FLKYDPNYNDDDDEEMGGTEADEDDMGDFDDDDDFEADNGFDDDDDDASWKVRRCAAKTL
YTLISTRGSGDLLEDGTLYAQVAPTLIQRFNEREENVRLEVIATMASLIGRTGEGVVVEF
SPDESLAYANQAPQSRKRRRESGGSATFDTKSFISRSAGLTSPTIEPIPVSGPRADLAKL
TPMIVKAVVRLLKTSPIPTKQALINLLDKMVSVQVGGLSEHFSQLVDPILDCYKPSSGPS
STTATSGGAASATANTLRIAALKLLGDISQTHSSSVLQPHLPKIIPCVASAVHHKFYKIS
SEAIGTAEQLVKALTPPRSKSIKPTQQEDVLKLYQVIVDRVSATDADVEVRQRAIHALGI
MLARTASPEGSSLLTETNRSDALSILSDRLKNETTRLAAVRAIDTIAVGSLEVSSAAKDQ
LQPSWIRDVSLELAAQLRKANRSLRGASLGALKNLIVSPAARSSLDAPTIQGLIDALLPL
LTTVDLHLLGPALLVLATLVTDDAKLVVTDQLNSALCGLLTSTLGGAVLDAVLLLVANIG
KQGVGQSLMSGLLRDVSTSGDSTVVGKAIGTLLVFGGSSVGVTLDNFLSELQNSSSDEAK
QCLALAVLGEAGLQLGEKSPLKPSTFTARFRSSYDKVPLAAATALGRAGAGNIPLYLPEI
LNMIKDGNEFLLLHSIKEILQQAGSNPTAITKHTTILWERLLAASQAEDNKAVGAECIGR
LTMIDPKAFMPQLKGYLTSPSASIRAMVIQAIRYTLSDSDDSLDSVLKVMLIDMLKVMLT
DTELENRRLALTTLNAAAHNKADLINPNLNQLLPLVMSESIVKEELIHEVMMGPFKHKVD
DGLEVRKSAYETLYALMETAFSRMNILDFYDRIIAGLKDEHDIRSLCNLMLNKLVILDPD
ETSRRLDAIADCFRVTLSVKLKETAVKQEVEKQDEAVKSTLRSTLNLHARIPSASTGMGA
QGSQHQTWRTYFEWVEKDFEGQLKSLREEKKDTIV
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaactcgataacaacaaatccgacctcacaaaccgtcgcatctttacttcca
aagcttcatgatgcggaccctgattatagattcatgtcactgaatgatcttttccaagtc
ttgacgattggaaaggcggatctccttcacaatgactatagtacagctgcaaagacggta
gatggcattatcagaaccctggatgatcaaaatggggaggtacaaaatttggccattaaa
tgtcttggaccgctcgtcacaaagttaccgagcaacataattgctccgctaatagagaga
ctttcgacattgacaactgaaaattccgttgacaactcaatacctgcaatggctctacga
acagtggtcatcactctcccaaggcccgtcagtggtgttgcgccgtccaaagaagtcctc
gaagcatattcggcgattagcagagttttgataccaagactagtaggtcgtatagtcact
tcaacatctaccaggggccaaaatcttcccaatcctccaccaggaatgctcgacccttcc
acaaactcagaaatcgactctgacgctgttgatgttttgattgaagtcgcaagatgcttc
ggccctcttctacaacatgcagaagttgaagcacttcaaaacttggtcgtcaatatctta
gaaaccgaaaaggctagttctgttgtcaaaaagcgggctgtagtcgctgtgtctctacta
gctatgcacttgacggattccgacctcagtggctttgtatctcacatcatcgagtctctt
cgtaacccacacttgaccccggtacaaagacgtctgtacattaccattctaggatcaatg
gcaagatcaatacccgctaggttcggtccttatttgaagacccttgcaccctttgtactt
tctgcattgagcgaacaagaactacaggatcagcttgaaaatgccgccgaggatggcgaa
agtaatcctgaaatagatgatgtgagggaatctgcactcgttgcactggacggctttctg
gcttcttgtggtacggaaatgcgaattcacacagaggaaacaattgcggcagctcttaga
ttcttaaagtatgatccgaattataacgacgatgatgacgaggaaatgggaggaactgaa
gccgatgaagacgatatgggtgatttcgacgacgatgatgattttgaggcagacaatgga
tttgatgatgacgatgatgatgcaagctggaaagttcgaagatgtgctgcaaaaactctc
tacacattgatctcaactagaggcagtggtgatctacttgaagatggaactctatatgct
caagttgctccaacccttattcagaggttcaatgaacgtgaagagaatgttcgacttgaa
gttattgctaccatggcatctcttattgggagaactggggaaggcgtggtagtcgaattt
tcgccggatgagtcgttggcttatgcaaatcaagcaccccagagtcgaaaacgcagaaga
gagagtggtggttcggctacttttgatactaaatcgttcatctcgagatctgctggtttg
acatcaccaaccattgagccgattcctgtgtcaggcccacgtgcagacctggcaaaattg
actcctatgattgtaaaggctgtcgtgagactactgaagacaagccccattccaacgaag
caagctctcataaatctcttggataagatggtttcggttcaggttgggggtctttcagaa
cacttcagtcagcttgtggatcctatcttggattgttataagccatcatctggaccatca
tctactaccgccactagtggtggtgctgcatcagcgactgcaaatactttgcgaattgct
gctctcaaattattaggcgacatttcacaaacccattcttcaagtgtgttacagcctcac
ctccccaaaattattccatgcgtagcgtcagctgtacatcataaattttacaagatatct
agtgaggctattggtacagctgagcagcttgtaaaggctttgaccccgccacgttcgaag
tcgattaaaccaacccaacaagaggatgttctgaaattataccaggtgatagttgaccgt
gtatctgctactgatgcagatgtcgaagtccgtcaacgtgctatacatgccctaggtatc
atgcttgctcgtacagcaagtccggaaggttcatcgcttctcacagaaaccaaccgaagt
gatgctctcagtatactcagtgacagactaaaaaacgaaactactcgccttgctgctgta
agagctatcgatactattgcggttggttcacttgaggttagttcagccgctaaagaccaa
ctgcagccttcgtggatccgagatgtatccctagagcttgctgcacaactccgaaaggcc
aacagatctctgcgtggtgcgagtcttggcgccctgaagaatctcatcgtatctcccgcc
gctagaagctccctcgacgctcccactattcaaggccttatcgatgcgcttcttccactc
ttgaccacagttgatcttcatcttctaggcccagcactactagtactggctactctggtc
acggatgatgcaaagcttgttgttactgatcagctaaattctgctctgtgcgggttattg
acctcaactttaggtggcgctgtacttgatgccgtccttcttttggtcgctaatatcggc
aaacagggagttggccaatctttgatgtctggtttgttgagggatgtaagtactagtgga
gactccacggttgtgggaaaagccatcggtacacttttggtattcggaggatcttcagtt
ggtgtcacactcgacaacttcttaagcgaactacaaaactcttcttcggatgaagcgaaa
caatgcctagccctggctgtactcggagaagctggattacaattgggtgaaaagtctcct
ttaaagccatcgaccttcacagctcgctttagatcttcttatgacaaagttcctcttgct
gcagcgaccgcattgggacgtgctggagctggaaacatacctttgtatcttccagaaata
ttgaatatgatcaaggatggaaacgaattcttacttctacattcaatcaaggagatactt
cagcaagccggcagcaaccccactgccatcaccaagcatactactattctttgggaaaga
ttgcttgctgcttcccaagctgaggacaataaagctgttggtgcagagtgtattggtcgt
ctgacaatgattgaccccaaggcattcatgccacaactaaagggctacctcacaagccca
tctgcttcgatccgggctatggttatccaagcgatccgttatactctatccgatagtgat
gactcgctcgactcagtattgaaagttatgctgattgatatgctcaaggtcatgctgact
gataccgagttggagaaccgtcgattggcactaactacattgaacgctgctgctcacaat
aaagcagatctcattaacccaaaccttaaccagttacttcctcttgttatgagtgaatcg
attgtcaaggaagagttgattcacgaggtaatgatgggaccatttaaacataaggttgat
gatggtctagaagtccgaaagagtgcatacgagactttatatgctcttatggagacggca
ttctcacgtatgaatattcttgacttttatgatcgtatcatcgcgggtttgaaggatgag
cacgatattcgatctctttgcaacctcatgttgaacaagttggttatcctcgatcctgat
gagacatctcgacgccttgacgcaattgcagattgcttccgcgttactctatcggttaaa
ttaaaggagacagcggtcaaacaagaagttgagaagcaagatgaggcagtcaagagcacc
ctccgctcaacactaaaccttcatgctcgcatcccatcagcaagcacagggatgggggcg
caaggcagccaacaccagacgtggagaacctattttgaatgggtagagaaggattttgaa
gggcagttgaagtccttgagggaagagaagaaagataccattgtttaa
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integrated database retrieval system
