Sclerotinia sclerotiorum: SS1G_00334
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Entry
SS1G_00334 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_00334
03036 Chromosome and associated proteins [BR:
ssl03036
]
SS1G_00334
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
SS1G_00334
Chromosome and associated proteins [BR:
ssl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
SS1G_00334
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
SS1G_00334
microRNA pathway
RISC loading complex
SS1G_00334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoL1
ArgoN
ArgoL2
PAZ
ArgoMid
PlyB_C
Motif
Other DBs
NCBI-GeneID:
5494165
NCBI-ProteinID:
XP_001598248
UniProt:
A7E4W2
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MSFDPAARGRGRGGRGGGDRGGRGGGDRGGRGGGDRGGRGGGDRGGRGGGDRGGRGGGYG
SGDRGGGRGGYGGGDRGGRGGGGRGRGGPVVVFKDSKYPAEAPDANVSKMENDYHRSLSE
IGALSKMTLSQRYPARPGYGTSGRPVQLFTNSFSLNTRPNFTLSRYMVDISPNMDAAKKK
RTQLFRLVLELPDIANIPIATDYASMLITPNKLPFTDERIFDIPWRNEGEDDPLPNAQVY
HVRISSPTSFNISDFVQFLSKTSATDVSDGQKEETIQAMNTLLGFYAKTDKRTVSIAGNR
HFSTAREGNEHNFTSLSMGLEAIRGFYQSVRPATGRLLLNVNVTHSVFLEPSALVSLFQK
LGYGHGVVDKIKRKRVVVTHLSAKKSKNGATIPREKSIWDLARPGDGSTEEHPPQVARYG
AGPKNVKFYISAEAPSTKGDAPPKPGTKKASAAALKVNMYISVFDYFKAKYPSFKLNPDF
PVVNVGSNLKPSYLPAEVCIIKPGQVVKKALLGDQTRTMLDFANRRPEPNAMSIITSGKQ
VLGLNAQDNPLLAKFGVQVGNSLITVQGRVLPPPAINYKNKQLRAMTTMPRDGSWNMRDT
RFHTCGDLGSWTYMVIESTSRAGGRVDQQLVRDAVDQFRRHLHGAGIGVQGYIGTPAPSI
KHIEGNEAATSHDVSTVFTKLTTSQNFPKPKFVLCILPVNDVMLYNTIKRHADTRAGIHT
VCVQYSKFVKGDLQYFGNVALKFNLKAGGINQTIDKLGVINEGKTMVVGIDVTHPSPGSK
ETAPSVAAMVTSTDKLLGQWSGICRLQNQARQEMVSDLESMFMRLLDIWSKKNKAWPENI
LIYRDGVSEGQYNILLDQELPKIRNACRQKYPADLTKKNLPRISIIVCGKRHHTRFYPKD
AESADSKSNCPAGTVVDRGVTESRNWDFFLQPHQCLMGTARPCHYFVILDEIFKSQKVKA
PHQTSADSLEELTHNMCHLFGRATKAVSLCPPAYYADLLCTRMRAYLADQVNVLDLGITK
CSGKNTCALPQ
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatccagcagcacgcggacgtggccgtggtggccgtggtggtggagatcgt
ggtggtaggggtggtggagatcgtggtggtaggggtggtggagatcgtggtggtaggggt
ggtggagatcgtggtggtaggggtggtggagatcgtggtggaagagggggcggttatggt
agcggagatcgaggtggagggcggggtggttacggtggcggggaccgtggtggccgggga
ggaggtggccggggccgtggcggtccggtagtcgtcttcaaagactccaaataccctgcg
gaggcccctgatgcgaatgtctccaagatggaaaatgactaccatcggagcttgtcggaa
atcggtgctcttagtaagatgactctcagccagagatatcctgctcgtccggggtacggg
actagtggccgaccggtccagcttttcaccaattcattctcgttgaataccagacccaac
ttcactttgagtcgatatatggtagacatatcgccaaacatggacgctgccaaaaagaaa
cgaacccagctttttaggctcgtactcgagttgcctgatattgcaaacattcctattgcc
acggattacgcttcgatgcttattacaccaaacaagttgcctttcacagatgagcgtatt
ttcgatatcccttggcgaaacgaaggggaggacgatccacttccaaatgcccaagtttac
cacgttcgcatcagctcccccacctctttcaacatctccgattttgttcagtttttatcc
aagacatctgcgactgatgtatcagacggacaaaaagaggagactatccaagccatgaat
acacttctcggattttatgcaaagactgataaaagaactgtttccattgccggtaacaga
cacttctctacggctcgagagggaaacgagcataattttacgtccctcagtatgggactg
gaggctatacgcggcttctatcagagtgttagaccagctactggtcgactactgttaaac
gtgaacgttactcactccgtctttcttgagcctagtgctctggtttctttattccaaaaa
cttggctatggtcatggtgttgtagataagattaaaaggaagcgtgtcgtagtgactcac
ttatctgcaaaaaagtctaagaacggtgcgaccattccgcgggagaaatccatttgggac
ttggctcgcccaggtgacggtagcacggaggaacaccctccacaggttgcaagatatggc
gctggaccaaaaaacgtcaagttttacatttctgctgaagcaccgtcaacgaaaggcgat
gctccacctaagcccggaacaaaaaaagcttctgccgcggcccttaaagtcaatatgtac
atctcagtatttgattactttaaagccaaatatccgagctttaagttgaacccagatttt
ccggtggtcaacgttggtagcaaccttaaaccatcttatctaccagcggaggtctgcatt
ataaaaccgggtcaggttgtaaaaaaggctctactaggggatcaaactcgaacgatgtta
gattttgcaaacagaaggcccgagcccaatgctatgtccattatcacatctggtaaacaa
gtcttgggactaaatgctcaggacaatccccttttagctaaattcggagttcaggttggt
aacagcctgataactgttcaaggtcgtgtgttaccgccacccgcaatcaactacaagaac
aaacaacttcgcgcaatgacgacgatgcctagggatggttcttggaatatgagagacacg
cgctttcatacttgtggagatctaggctcatggacttacatggtaattgaatctacaagc
cgtgctggtggtagagtggaccagcagcttgtgagagatgcagtagatcaattccggaga
caccttcatggtgcaggtataggtgttcaaggttacataggtacgccagcaccttctatc
aagcacatagagggaaatgaagcggctacctctcacgatgtttcaactgtctttacgaag
ctcactacatcccaaaactttccaaagcccaagtttgttctctgtatccttccggtcaac
gatgtgatgctttataacacgataaagagacatgcagataccagagctggtatacataca
gtttgcgtacaatactcgaagtttgtaaagggagatctacaatactttggcaatgttgcg
ttgaagttcaatctcaaggcgggtggtattaatcagacaatcgacaaactcggcgttatc
aatgaagggaagacgatggttgtcggcattgatgttacacatccatcccctggatcgaaa
gagacagcccctagtgttgctgccatggtaacaagcactgataaactattgggccaatgg
tcaggtatttgtcgcttgcagaaccaagcccgacaagagatggtgtcagatcttgaatca
atgttcatgaggctcttggatatctggagcaagaaaaacaaagcatggcctgaaaacatc
ctaatttacagagatggtgtttcggaagggcaatacaacattttgctcgaccaagaatta
ccgaagattaggaatgcttgtcgtcaaaagtacccagctgatttgaccaagaaaaacctc
ccgagaatctcgatcatagtctgtggtaaacgtcatcacacacggttctatccaaaggat
gctgaaagcgctgattctaaatcaaactgtcctgctggaaccgtcgtcgaccgcggggtt
actgaatctcgcaactgggactttttcctccaacctcatcaatgtctcatggggacggca
agaccatgtcactactttgtcatcctggatgaaatcttcaagtcccagaaggtgaaggct
cctcatcagacctcggccgattcccttgaggagttaacgcacaacatgtgccatctgttc
gggcgagcaaccaaggctgtcagtctgtgtccacctgcatattatgcggatttgttatgc
acgcgcatgagagcatacctcgcagatcaagtcaatgttctggatctaggcatcacgaaa
tgttccggcaaaaacacctgtgctctgcctcaataa
DBGET
integrated database retrieval system
