Sclerotinia sclerotiorum: SS1G_00341
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Entry
SS1G_00341 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_00341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_00341
03036 Chromosome and associated proteins [BR:
ssl03036
]
SS1G_00341
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SS1G_00341
Chromosome and associated proteins [BR:
ssl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SS1G_00341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
5494172
NCBI-ProteinID:
XP_001598255
UniProt:
A7E4W9
LinkDB
All DBs
Position
Unknown
AA seq
1885 aa
AA seq
DB search
MSFGGGFGGGFGQQNKPTAFGGGFGSTPANNTGSVFGSGATNNTGFGANNNTGGGMFGGG
GTSSGFGGNTGNSTGFGGFGAKPATTAFGSPAATTGSNMFGSGATTGTTGAFGGGFGSSA
APTSGFGTTNTGGGLFGNKPGGFGSTTTTNTPSAFGGGSGFGSTAGTGFGAAASSTQCEG
TQAVPFTAFVEKEPNSSMQNAYQSISFQQPYKNFSPEELRLADYSKGLRYNQNQGGAFGT
NTNFGGFGSSNQATTGGFGSANNATTGSTIFGGGATGTGFGTSQPASTGFGSNTATTGGG
LFGAAKPATGGLFGAQPQAQTGGGLFGSTTNSATTGGFGSTNTGFGSANTGTGGGGLFGN
NSATAAKPAFSFGNTQPAATTGGFGSSGTGFGTANTNTGGGLFGNTQQQSTTTGFGGAAQ
QQPASTNAFGGGFGSNNTNTGGGLFGNTQQKPATTGLFGAQPAASNAGGLFGSQPAATNN
SPFGGANNTNTGSSLFGAKPATAGGLFGQPAAQTNTGTNSLFGGGFGAANQNNQPQQSTG
LFGASLGNNSNQQKPGGLFGQPQQQGSSLFGNSGTQQQSNLFGSSTIGQQQQQQQPAQSQ
GSIFGTGSIFTQSQQGGTPQSFSTSLTDPGAYGTRSMFAENNSQENLKNPGPLATPLSSA
NRQKKTAALPLYKLNASGSSRFNTPSKSLRGGFDLFKNPVTPDHPVESPNKSIIKKQVTF
ETPTPSPSATINGNVNGTTDFDVNGTGNPNGTSPTAPLQSVTNNSVKTPSVTSPEMTEVN
KNKQLTIVNENGAKSPKSPPNLPTGAYWMTPTREEIEKMTRQERQRVSGFTVGREGVGQI
DFDTRVNLDGINLDDIFNKIVILEPRRAEVYPDDPSIQKPQAGHGLNVPSTITLFNSWPR
NASKRGSDDIRLKKHIKKLQTVEDTEFVSYDADNGTWVFKVPHYTVYGLDYDDEEDDEED
DMEVEEDEGDFGNSTLTAPPDTPTPQSRTPKANPQYFNQSFASDMDFTQTESDPEDTFEF
RKRKVLPGAFDDEEVYSEEEVDNSFVQDQESFLDNRSVGSQSENGVEEAIDQDDVYEDDE
SVSIVDQEMAGSYPETGNTAERMNDSQDEDDTMEFGTPGAIVKARARAQKLDTPSKLRFP
AANDWAATLRATASPKKQDRAVLKSLIDVHGDEKQSALARTEVPTTNENFSKSYGFASVM
DVHNDLFGKVTSPIKVSNYKRGDNFEKPFNKKSKIGDDESEMPEEDRAFHDSVKPSWGPD
GTLVYAASAGSKPFTKSRRAREKDGLLTIQKSGIAEASNVRFAKFSNESSADALKKHQSL
TVIEDSEGVPYATLPDSFSFLDFFDEQNARDPSVVHEKLVWELASILFDAIEVPQELNHI
ENAVERLRKDKLSVFWQKLVVQASAQHVAMARSNEEKAIASLSGHNIPEACGHLINGKDF
HLATLIAMIGGKESLKRDIREQLSQWRTTKALSEFSQPVRALYELLAGNVCVCDGNKAPH
MEDRIESFIISKRFGLDWRQAFGMRLWYAIKVNEEFDSAVKIFDEEMTQDKETSRPLAWY
VEQKIPKLWQDDQLNEREDLLWGLLKLYTYDDADLEAILRPENSQLSPLDMRLSWQLSRA
LTSFGALDYQEAAEEKKDQTTLAFASQLNNEGHWLDAVFVLLHLSSTNARAKSIQDHLAR
HAGKIGSEDSQSFVTLTQNYKIPASWIWEAKALYTRSVRKDPLSEVECLTKAGMFEEAHR
TFAKEVAPKALIEFDYATLRNILASFEGKENSISEWHLGGEIYQDFLTLVECQKKNQELD
FAVLERLLVGLPAVVEESRHPAFMETVAIETISGVVAKAVVDMEKKGENVDLPKVLRLPL
TEDRYLKHTIDLSLGYYRSVMAGGR
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgggggaggatttggcggtggcttcggccaacagaataaacctactgcattt
gggggaggctttggtagtacacctgcgaacaatactggctcagttttcggttctggtgcc
accaataacactggcttcggtgcaaataacaatactggtggtggtatgtttggaggcggc
ggaacctcttctggtttcggcggtaacactggtaacagtactggtttcggaggatttggc
gcaaaacccgcaactacagcttttgggagtccagccgcaaccacaggtagtaatatgttt
ggaagtggtgctacgacaggaacaactggtgcatttggtggtggattcggaagcagtgct
gcacccacatcaggattcggtactaccaacactggaggtgggttatttgggaacaaacct
ggtggcttcggttctactactactacgaacacgccttcagctttcggaggaggctccgga
tttggcagcactgcaggaactggatttggagctgctgcttcaagtacccaatgcgaaggc
acccaggctgtccctttcacagcgtttgtcgagaaggagccaaattcatccatgcaaaat
gcctaccaaagcatatcctttcaacaaccctacaagaacttctccccggaggagcttcga
ttggccgattattccaagggtttgagatacaatcagaaccaaggtggtgcatttggcacg
aacacgaattttgggggattcggtagctctaaccaagctacaacaggaggttttgggtct
gcgaacaacgctacaacaggttcaacaatatttggtggtggagcaacaggtacaggtttc
ggtacaagtcaaccagctagcacagggtttggatcgaataccgctacaaccggcggtgga
ctctttggagccgcgaaacccgcgaccggtgggctatttggtgctcaaccgcaagcgcaa
accggcggaggcttgtttggatcgactaccaatagtgcaactaccggaggatttggctcg
acaaatactggttttggatcggccaataccggcaccggaggaggtggtctctttggtaac
aatagcgctacggcggcaaagcctgccttcagcttcggcaatacacaaccagcagccacc
acgggaggctttgggtcatcaggaactggatttggaacggctaataccaatactggagga
ggtctctttggaaacactcaacagcagagcacaacaactggatttggtggcgcagctcag
caacagccagcatcgaccaatgcttttggaggcggctttggatctaacaacactaatact
ggtggaggtcttttcggaaatacccaacaaaagccagctactactggcctttttggcgcg
caacccgctgcttcaaacgctggaggactatttggttctcaaccagccgctacaaacaac
agtccatttggcggtgcgaataacaccaacacaggaagcagcttgtttggtgccaaacca
gctactgccggtggtcttttcggccagccagcggctcaaacaaataccggcacaaacagc
ttatttggtggtggtttcggtgctgcgaatcaaaacaaccaaccccagcaaagcactggt
ctttttggtgctagtctcggaaataatagcaaccagcagaaacctggcggcttgtttggc
cagcctcagcagcaaggatcaagcttgtttgggaactctggtactcaacaacagtccaat
ttatttggttcatctacaattggccaacagcagcaacaacaacaacctgctcagtcccag
ggttccatctttggaacaggttccatcttcacccaatcacaacagggtgggacgccacaa
tcattcagcactagtctcactgatcctggagcttatggcacgagatccatgtttgctgag
aacaactctcaggaaaatctcaagaaccctgggcctctcgcaaccccgctgtcaagtgct
aacaggcaaaagaagacagctgctcttccgttgtacaagctaaatgcatctggttcttca
cgattcaatactccgagcaagtcacttcgtgggggttttgaccttttcaagaatccagtc
actccggatcatccagtcgaatctcctaacaagtccataatcaagaagcaggtaactttc
gagacaccaacaccgtcacctagcgccactattaatggcaatgttaatggtaccactgat
tttgatgtcaatggtaccggtaatcccaatggaacttcacccactgccccactgcaatcg
gttaccaacaattccgtgaaaactccttcagtcacctcacccgagatgacagaagtcaac
aagaacaagcaactcactatcgttaatgagaatggagccaagtcacctaagtctcccccc
aacttacccaccggcgcatattggatgactcctacaagggaagaaattgaaaagatgact
cgccaagaacgtcaaagggtatcgggctttaccgtcggccgcgagggcgttggtcaaatt
gactttgatactagggtcaatctcgatggcatcaatcttgatgatatttttaataagatt
gttattctcgaacctagacgcgcggaagtttatccagacgatccatctattcagaaacct
caggctggtcatgggcttaatgtcccatccaccattactctgtttaattcatggcctcgc
aatgcttctaagagaggaagcgacgatatacgcttgaagaagcatatcaaaaaactgcag
accgtagaagataccgagttcgtgagttacgacgccgataatggtacctgggtattcaaa
gttccgcattacacggtatatgggcttgattatgacgatgaggaagatgacgaggaagat
gacatggaggtcgaagaagatgagggtgattttgggaatagtactctcactgctcctccg
gacacgccaactccacaatcacgtacacctaaggcgaatccacaatacttcaaccaatcc
tttgcatctgatatggatttcacacagacagagtcagaccctgaggatacatttgaattt
agaaagagaaaggtccttccaggtgcttttgatgacgaagaggtctattcagaagaagaa
gttgataattcatttgttcaggaccaggagtcttttttagataatcgctccgtgggttca
cagtcagaaaacggcgtcgaggaagcaattgaccaagacgacgtctatgaggacgatgaa
tctgtcagtatcgtggaccaagagatggcgggctcttatccagaaactggcaataccgcg
gagcgaatgaacgactcgcaagacgaagatgatactatggaatttgggacacctggtgca
attgtgaaagctagggcaagagcacaaaagctagatacaccatccaagctcagatttcca
gccgcaaatgactgggccgctactttgagagcaactgccagtccaaaaaagcaggatcgt
gctgttctaaaaagcctcattgatgttcatggagatgagaagcagtctgccttggcacga
actgaagttccaacaactaacgagaacttttcgaagtcgtatggttttgcatcggtcatg
gatgttcacaatgacttgtttgggaaggtcacgagccctatcaaggtttcgaattataag
agaggtgacaattttgagaaaccttttaataagaaatccaaaattggtgatgatgaatca
gaaatgccggaagaggaccgggcgttccatgactctgtgaagccaagttggggtccggac
ggaaccttagtctacgccgcatctgccggttctaaaccttttactaaatcgcgtcgagct
cgtgagaaggatggtctactcacaattcaaaagagtggcattgctgaggctagtaacgtt
agattcgctaagttttctaatgagtcttcagcggatgcacttaaaaagcaccaatccttg
acggtcatcgaggactctgagggtgttccttatgcaacattgccagactcattttccttc
ctagacttcttcgacgagcaaaatgctcgagatccgtcagtagtgcatgaaaagcttgtg
tgggaactagccagcattctttttgatgctattgaggttccgcaagaactaaatcacatt
gaaaacgcggttgagcgccttcgtaaagacaaattgtctgtattttggcaaaagttggtt
gtgcaagcatcagctcagcatgttgcaatggctagatcgaacgaagaaaaagcaattgca
tcattatctggccacaacattccagaggcttgtggacatctcatcaatggaaaggacttc
catttagctacgcttattgcaatgattggtggcaaggaaagtctgaagagagatatccgc
gagcaattatcacagtggcgaaccacaaaagccctgtctgaatttagtcagcccgttcga
gctctctacgaacttcttgctggtaatgtttgtgtctgtgatggcaacaaagcaccccat
atggaagatcgtatcgagtccttcatcatttctaaacgcttcgggcttgattggcgacaa
gcatttggtatgagactgtggtatgcaatcaaagtaaatgaggagttcgatagcgcagtc
aaaatcttcgacgaagaaatgacacaagacaaggagacctctcggcctctggcctggtac
gtcgaacagaagattcctaagttatggcaagatgaccagcttaatgagcgtgaggatctt
ctctggggcctgttgaagttgtacacctacgatgatgccgatctcgaggcaatcctgcga
cctgagaattcgcaattatcccccttggatatgcgcctctcttggcaattgagtcgagct
ttgacttcctttggtgccctagactatcaggaagctgccgaggagaagaaggatcagact
accttggctttcgcttctcagctcaataatgaaggccactggcttgacgcagtcttcgtt
ctacttcacttgtcttcgaccaacgctcgagcaaaatctattcaagaccatcttgctcgg
catgccggaaaaattggatccgaagatagccagagttttgttaccttgacacaaaactac
aaaatccctgcatcatggatatgggaggcaaaggccttgtacactcgaagtgttaggaag
gatccactaagtgaagttgaatgtttgaccaaagccggaatgttcgaagaagctcatcgc
acttttgcaaaggaagttgcacccaaggcactcattgaattcgactacgctacacttcgc
aatatccttgcaagctttgagggcaaggagaatagtatttcagaatggcatcttggtggt
gagatctatcaagatttccttactttggtcgaatgtcaaaagaagaaccaagaactcgat
tttgctgtattggaaagattgttggttggattaccggctgtagtggaagaatcgcgccac
cccgcctttatggagacggtggcaatcgaaacgattagtggagtagtggcgaaggccgtg
gtggatatggagaagaagggcgagaatgtggacttaccgaaggttttgagattacccctc
acggaggatagatacttgaagcatacaattgatttgagtttgggatactacaggagtgta
atggcgggtgggagatga
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integrated database retrieval system
