Sclerotinia sclerotiorum: SS1G_00608
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Entry
SS1G_00608 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl04138
Autophagy - yeast
ssl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
SS1G_00608
04148 Efferocytosis
SS1G_00608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_00608
Membrane trafficking [BR:
ssl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
SS1G_00608
Hops complex
SS1G_00608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
DUF2175
zf-RING_Vps41
zf-RING_5
zf-RING_16
TPR_Vps41
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-C3HC4
zf-rbx1
zf-RING_UBOX
DUF7117
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
5495112
NCBI-ProteinID:
XP_001598519
UniProt:
A7E5N3
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MALDPSSGYVAARNLQDLNEIALPIFNVEKVQLQFSIASDFVAAQVANNVLVLALSDGRI
LRIDLDNPADIDDIDLPKKTSEVGVIRRMFLDPTASHLIICTSQGENYYIHTQSRQPRPL
SRLRGVSIECIAWNPSLPTSSTREILIGTSDGMIYEGYIETATEFYRKEDKYLKALMRLP
DGPVTGLWVDLVTGRPDAREVRRVMIATQSRVLHLVGKIGRVAHEGGASIFTRLFETEQP
TIHELSRISTTAASSLVVSPNHPDSASMESLTPDRTFAWLSSQGVYYGTLMTTPATSDLG
ARLFTEAKLLPRSQLPASENSMGRKKPVPDSIDSIALTQWHILHLIGGRVVAVNRLDDRV
IFDQVVLEPGQQALGLFADQEKNTFWLFTTQEIYEIVVTDEDRDVWKVMLQTEHFDAALR
YARGPAQKDAVATASGDYLISKGSYLEAAGVYGKSSKPFEQVALIFVDNDQQDALRKYLL
TKLTTYRKASTMQRIMIASWLVEIFMSKLNSLDDTIITKAELSENLNPTETRNQLDTIRA
EYQDFVTKYKTDLDKKTTYDIISSHGREDELLFFASAVNDYNYVLSYWIQRERWKEALDV
LKRQTSPEIFYRYSSGLMTHVATDLVDILMRHPDLKPRNLIPALLNYDKHFQGPLSKNQA
VRYLLHVINHLNSTEAAVHNTLISIYASHPSKDESALLSYLESQGDDPSFDSDFALRLCI
QHSRVQSCVHIYSTMGQYLQAVELALAHSEIDLASLVADRPLSNPPLRKKLWLAVAKKVI
SQSNGIKTAIEFLKRCDLLKIEDLIPFFPDFVVIDDFKEEICAALEDYSRNIDALKKEMD
ESSQTATNIKIDIAALDQRYAIVEPGEKCYVCTLPLLSRQFFVFPCQHAFHSDCLGKRVM
DQVGVGRAKRIREVQMLISKGMVMGAKREALIAELDGLVASAW
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgacccatcaagcggctatgtagccgcaagaaatctacaagatcttaatgag
attgcacttccaatatttaacgtcgagaaagtacaactacaattctctatagcctccgac
tttgtagcggcgcaagtcgcaaacaatgtcctggttttggcactttcagatgggaggatt
ctaagaatcgacctggacaatcccgcagatatagatgatattgacctacctaaaaagacc
tcggaggttggagtgatacggcgcatgttcctcgacccaacagcttcacatctgattata
tgtacttcacaaggggagaactattacattcatacacaatccaggcaacctaggcctctt
tctcgattgcggggtgtatcgatagaatgtattgcttggaatccttcgttacctacatct
tcgaccagggagatacttattgggacttccgatggaatgatttatgaagggtatatagaa
actgccacggaattctacaggaaggaggacaaatatttaaaagcgcttatgaggcttccg
gacggacctgttactgggctctgggtggaccttgtcactggtagacctgacgccagagaa
gtccgacgagtaatgatagctacacaaagtcgggttcttcacttagtaggcaagattggc
cgggtcgcacatgaagggggtgcatcaatatttacacggcttttcgagacggaacaaccc
acgattcatgaattgtctaggatatctacaactgcagcttcttctcttgtggtgtcccca
aatcatcccgactcagcgtccatggaaagtctaaccccagatcgtactttcgcatggctt
tcgtcacaaggtgtgtactatggaacgttaatgactacaccagccacctcagatttgggc
gcaagattatttaccgaggcaaaattgttacctaggtctcaattgccggcttcggagaat
tccatgggtcgcaagaagccagttccagactcaatcgactctatcgcgttgactcagtgg
catattcttcatctgattggtggaagggtcgttgctgtcaatcgactagatgatagagta
atatttgatcaagtagtcttggaacctggccagcaagcacttggactgttcgctgaccaa
gagaagaacacgttttggctcttcactacacaagaaatttatgaaattgttgtcacagat
gaagatagagatgtatggaaagttatgctacagaccgaacattttgacgcagcgttgcgt
tatgccaggggcccagctcagaaggatgctgtcgctacagcgtctggtgactacctcatt
agtaaaggttcatatcttgaagctgcgggagtatacggaaagagtagcaaaccattcgaa
caagttgcacttatattcgttgacaatgaccaacaagatgctttacgaaagtatcttctg
acaaaacttacgacgtacagaaaggcctcgacaatgcagcgtattatgattgcgagttgg
ctggtagaaatatttatgtcaaagcttaattccctagatgatacgatcatcactaaagct
gaattgtctgaaaatttgaatcctaccgagactagaaatcaattagacacaattcgagcg
gaataccaagactttgtcacaaaatacaaaactgacctcgacaagaagactacgtacgac
ataatcagcagccatggcagggaggatgaactcttattctttgccagtgctgtaaatgat
tacaattatgttctctcctactggatacagagagagcgatggaaggaggcattggatgtg
ttgaagaggcaaacatcacccgaaatcttctatcgatatagcagtggactcatgacgcac
gtagccactgaccttgtcgatattctaatgaggcatccagacttgaagcctcggaatctt
attcctgctttactgaactacgataagcattttcaagggcctctgtcaaaaaaccaagcc
gttcgttatctcctacatgttatcaatcacctaaactcaacggaagctgctgtacataat
acactaatatcgatttatgcctctcacccatcaaaagatgaatcggctctcctctcatac
ctcgaatcgcaaggtgatgatccaagttttgattcagactttgctcttcgactttgcatt
caacactcgcgagttcaatcttgtgtacacatctatagcaccatggggcaatatttacaa
gctgtagaactcgccctcgcacattcggaaatagatctcgcctctctcgttgccgaccgc
cctctttcaaatcctccactacgaaagaagctctggcttgcagttgccaaaaaagtaata
tctcaatcaaatggcatcaaaaccgccattgaatttctcaaacgttgcgatcttctcaaa
atcgaagatctcatccctttcttccctgacttcgtcgtaattgacgacttcaaggaagag
atctgtgctgcgctcgaagactacagtcgcaatatcgatgccctcaagaaagaaatggac
gaatcttctcaaacggctacgaatattaaaatcgacatcgcggctcttgatcaacggtat
gctattgtggaaccaggagaaaaatgctacgtgtgcacgttaccgctactgagtcgtcaa
ttctttgtctttccttgtcaacatgcttttcatagtgattgtttgggtaagcgagttatg
gatcaggtgggtgtgggtagggcaaagaggattagagaggtacagatgttgattagtaag
ggaatggttatgggtgcgaagagggaagcgttgattgctgagttggatggtttggtggcg
agtgcttggtga
DBGET
integrated database retrieval system