Sclerotinia sclerotiorum: SS1G_00885 Help Entry SS1G_00885        CDS       T01071                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism ssl  Sclerotinia sclerotiorum Pathway ssl03020   RNA polymerase ssl03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:ssl00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     SS1G_00885   09124 Replication and repair    03420 Nucleotide excision repair     SS1G_00885  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ssl03021]     SS1G_00885    03400 DNA repair and recombination proteins [BR:ssl03400]     SS1G_00885 Enzymes [BR:ssl01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      SS1G_00885 Transcription machinery [BR:ssl03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      SS1G_00885 DNA repair and recombination proteins [BR:ssl03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       SS1G_00885 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 RNA_pol_Rpb2_4 Motif Other DBs NCBI-GeneID:  5495039 NCBI-ProteinID:  XP_001598796 UniProt:  A7E6G0 LinkDB All DBs Position Unknown AA seq 1267 aa AA seqDB search MADYEEGYEYDDFGEEDAGITAEDCWTVISSFFDAKGLVSQQIDSFDEFVQTTMQELVEE NSQLTLDQNNPPSSNDNPIALRRYEIKFGTIMLSRPAMTEGDGSTQVMLPQEARLRNLTY SSPLYIEMTKSTQVAVERPVPLNELDDEQEADLANGGEHPTRLVWEYEDGDPDGAKGGPA PERVYVGKLPMMLKSEYCFLKNCDEDDLYGWNECPYDQGGYFIINGSEKVLIAQERSAAN IVQVFKKPANQAVSYLAEIRSALEKGSRLISSLQIKLYDKGDSGRGGFGKTVKSTLPYIK QDIPIAIVFRALGVVSDEDILNHICYDRNDTQMLEMLKPCIEEAFVIQDREVALDFIGKR GNGTSLTRDKRIKYARDIMQKELLPHISQKEGSETRKAFFLGYMVHKLLQCALGRRETDD RDHFGKKRLDLAGPLLAKLFRNLFRRLTTDVYRYLQRCVENNREFNLTLGVKSTTITNGL KYSLATGNWGDQKKAASSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKIAKPRQLHNT HWGLVCPAETPEGQACGLVKNLALMCYVTVGTPSDPIVEFMIQRNMEVLEEYEPLRAPNA TKVFVNGVWVGVHRDPAHLVKCVQDLRRSHLISHEVSLIREIRDREFKIFTDAGRVCRPL LVIDNDPDSPNKGNLVLNKDHIRRLEDDQSLPSNMDKDEKVHHGYYGFQGLINDGVVEYL DAEEEETVMITMTPEDLDISRQLQAGYQIRPDDSGDLNKRVKAPINPTAHVWTHCEIHPS MILGICASIIPFPDHNQANSVATKSPRNCYQSAMGKQAMGVFLTNFDVRMDTMANILYYP QKPLATTRSMEFLKFRELPAGQNAIVAIMCYSGYNQEDSVIMNQSSIDRGLFRSLFYRAY TDQEKRIGMNVVEQFEKPYRSDTLKLKQGTYEKLDDDGIVAPGVRVTGADIIIGKTAPIA PDSEEMGQRTKAHVKRDASTPLRSTESGLVDQVLLTTNAEGLRFVKVRMRTTKIPQIGDK FASRHGQKGTIGITYMQQDMPFTREGVVPDLIINPHAIPSRMTIAHLIECQLSKVSSLRG LEGDATPFTEVTVDSVSKLLRAHGYHSRGFEIMYHGHTGRKMMAQVFLGPTYYQRLRHMV DDKIHARARGPVQILTRQPVEGRARDGGLRFGEMERDCMISHGASAFLKERLFEVSDAFR VHICDICGLMTPIAKINTGSFECRPCKNKTKISQIHIPYAAKLLFQELAAMNIATRMFTK RSGITVR NT seq 3804 nt NT seq  +upstreamnt  +downstreamnt atggctgattacgaagaaggatatgaatatgatgactttggagaggaggatgcgggtatc acggcggaggactgctggacggttatttcttcttttttcgatgcaaaaggtctagtttcg caacaaatcgactctttcgatgagtttgttcaaacaaccatgcaagagctcgtcgaagaa aattcacagcttacacttgatcaaaacaacccaccatcatcgaatgacaatcctatcgcg cttcgcagatacgaaatcaagttcggcaccattatgctttcgcgaccagcaatgaccgaa ggcgatggtagcacacaagtcatgttgccacaagaagcccgtttacgaaatctcacgtat tcaagtcccctttacatagaaatgacgaagagtactcaagtcgccgtagaacgtcctgtt cctctcaacgagctggatgacgagcaagaagctgatttggcgaacggcggagaacatcct acacggttagtttgggagtatgaagatggcgaccctgatggtgctaaaggtggtccggct ccagaacgagtttatgtcggaaaattacctatgatgctgaagtcggagtattgtttcttg aagaattgtgacgaagacgatctttacggatggaatgaatgcccttatgaccaaggtgga tactttatcatcaacgggagtgagaaggttctcatcgcacaagagcgcagtgcggccaac atcgttcaagtctttaagaagccagcgaaccaagcagtttcatacttggccgaaattcga agcgctctcgagaagggttcgcgccttatctcctcgttacagatcaaactatatgacaag ggtgacagtggccgaggaggttttggtaaaactgtcaagtcaactttaccttacatcaag caagacattccaatagccattgtctttcgtgcacttggcgttgtatcagacgaggatatc ttgaaccacatctgctacgatcgtaatgacacacaaatgctcgagatgttgaaaccatgt atcgaggaggctttcgtcatccaagatcgtgaagttgctctcgattttattggaaaacgt ggtaacggtacgtctttgactcgtgataagcgtattaaatatgcacgtgacatcatgcag aaggagctgttgcctcatatctctcaaaaggaaggtagcgagaccaggaaagccttcttc ttgggttacatggttcacaaacttcttcaatgtgctcttggacgtcgggagaccgatgat cgagatcatttcggcaagaagcgtctggatttagctggacctttacttgcaaagctcttc agaaatctgttccgcagattaacaacagatgtctacaggtacctgcaacgttgcgtggaa aacaacagagagttcaatttgacgctgggtgtgaaatccacgacgatcacgaacggtctg aaatattctttggctacaggtaactggggtgaccagaagaaggcagcaagttctaccgct ggtgtttctcaagtattgaacagatataccttcgcatcaacactttctcatttgcgccga accaatacgcctatcggacgtgatggaaagatcgccaaacctagacaactgcataatact cattggggtctggtttgtccagcagagacgccagaaggtcaagcttgtggtttggtcaag aatttagctttgatgtgttacgttacagttggtacgccaagtgatccaatcgttgagttc atgattcaacgaaatatggaagtgctggaggagtatgaaccgctccgagcacccaatgca acaaaggtcttcgtcaatggtgtttgggttggtgtccatcgagaccctgcccatttggtt aaatgtgtacaagatcttcgtagatcacatttgatttctcatgaagtctcacttattcga gaaattcgagacagagagttcaagattttcactgatgcaggacgagtgtgcagacctctg ttggtcatcgacaatgatccagacagccccaacaaaggtaatttggtactgaacaaggat cacatccgccgtttggaggatgatcaatctctgccatcgaacatggataaggatgagaaa gtacaccatggttattatggattccaaggtttgattaatgatggtgtggttgaatattta gacgccgaggaagaggagactgttatgattaccatgacacctgaagatttggatatttct cgacagcttcaagctggttatcaaattcgtcctgatgacagcggtgatttgaataagcgt gtcaaggcacctatcaatccaactgcgcacgtctggactcattgtgaaattcatccaagt atgattctgggtatctgtgcaagcatcattcccttcccggatcataatcaggctaattcc gttgcgacaaagtctccccgtaactgttaccaatctgctatgggtaaacaagctatggga gttttcctcactaacttcgatgtccgcatggataccatggccaacattttgtactatcct caaaagcctctcgccactacccgttctatggagttcctgaaattcagagaattgcccgca gggcaaaacgctattgtagccatcatgtgttactcgggttacaatcaagaagattccgtt atcatgaatcaaagtagtatcgatcgtggactgtttcgaagtttgttctatcgagcatac actgatcaagaaaagcgtatcggtatgaacgttgtagagcaattcgagaagccatataga tccgacaccctaaagcttaagcagggcacctatgagaaactcgatgatgatggaattgtc gcacctggtgttcgtgtcactggtgctgatatcattattggaaagacagcgccgattgct cctgattccgaagagatgggtcaacgtacaaaagctcatgtcaagcgtgatgcgtcgaca cctcttcgaagcaccgagagtggtcttgttgatcaagtacttcttaccaccaacgccgaa ggtctccgattcgtgaaggttagaatgagaaccacgaagattcctcaaattggtgacaaa tttgcttcccgtcacggacaaaagggtaccatcggtatcacatacatgcaacaggacatg ccgttcacgagggagggtgttgttccggatcttattattaatcctcacgctattccatct cgtatgacgattgcacatttgatcgagtgtcaattgagtaaggtttcttctttgcgtgga cttgagggtgacgcaacaccatttaccgaggtcactgtcgattcagtctccaagctactc cgtgcacatggctaccattctcgtggtttcgagatcatgtaccatggtcatactggtcgt aagatgatggcacaagtcttccttggtccgacatattaccaacgtttgcgccatatggtc gatgacaagatccatgcccgtgccagaggtcctgtacaaattttaacaagacaacctgta gagggtcgtgctagagatggtggtcttcgtttcggagagatggaacgtgattgtatgatt tctcatggtgcaagtgctttcttgaaggagagattatttgaggtttcggatgctttcaga gttcatatctgcgacatctgtggactgatgacaccgattgctaaaattaataccggttcc ttcgagtgtcgtccctgcaagaataagactaagatttctcaaatccacatcccgtacgcc gctaaattgcttttccaagagttggcagcaatgaacatcgccacaagaatgttcaccaag agatctggcattacagtgcgctga

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