Sclerotinia sclerotiorum: SS1G_00911
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Entry
SS1G_00911 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03030
DNA replication
ssl03410
Base excision repair
ssl03420
Nucleotide excision repair
ssl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SS1G_00911
03410 Base excision repair
SS1G_00911
03420 Nucleotide excision repair
SS1G_00911
03430 Mismatch repair
SS1G_00911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssl03032
]
SS1G_00911
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_00911
DNA replication proteins [BR:
ssl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SS1G_00911
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SS1G_00911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
AAA_33
AAA_16
AAA_14
RNA_helicase
RuvB_N
AAA_18
NACHT
AAA_28
Motif
Other DBs
NCBI-GeneID:
5495065
NCBI-ProteinID:
XP_001598822
UniProt:
A7E6I6
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MPADIRSFFGGKPGTSTSTPIRAKENKEEDSKKKKSKSRKIIEDSDDEEPVKNEEPEGKE
TTADDFFASSNKPKTKPAKSTPIKSNHSPPETNTRTSSRKKASTTYQEIKDEDDFDEDDD
IFAADVKKAGKRKDDGYVEDDSDDEVLPKPKRVVSRSKPAPAKKDKDIEMMDVGDDDAFI
VPDDDEDDDMMIIEKPAKNSAANSKKRKSVDLESSDEEDVQPKKSIKNKSSKPPPAKKPR
APAKKAAALESSSIQAILDSIPTVRAPTPPPKDDSVKFKWQPGGGGNSAAPPAAGCAEIP
EGAENCLAGLTFVFTGVLNTISRDEGIELVKKYGGKITGAPSSKTNYVVLGSDAGPSKLR
KIRELKIKSVDEEGLFAIIKAMPPNGGDGKAAEKNNEKKAAEERKIRQDAEEMDREERRK
AAEAEKAEKEAQRLAAAKGKSSIPAAPRKAVVPTSSQLWTTKYAPTQMNQICGNKGQVEK
IQSWLKGWPNAHKYNFQKRGADGLGGYRAIIIHGPPGIGKTTAAHLAAKLAGYDILERNA
SDVRSKKLVETGLSEVLNNTSVLGYFAGDGKNIDKTKKKIVLIMDEVDGMSSGDRGGVGA
LAKICKTTDTPMILICNDRRLPKMKPFDFVTFDMPFKRPTVDMVRSRIATICHREGIKLP
VQVIDALIEGSNNDIRQIINMISTVKLDQTAMDFDQGKQMSKAWEKHVVLKPWDITHQLL
GGHMFASSSKSTLNDKIELYFNDHEFTPLMIQENYLNTKPQLANRADTPKEHKLKVLQLV
DQAAESISDGDLVDRMIHGSQQQWSLMPTHAVFSTVRPASFISGSMTGRTNFTSWLGNNS
KYGKLSRYVKEIQSHMRLRSSGDRHEIRQQYLPVLWDKLIRRLEVEGRDSVEDVIDLMDS
YFLTREDWDYIFELGVGEQDMEGVKLETQTKANFTRSYNARSHPVPFMKASNVFQPTKVA
AVKPDLEEAFEEEDEGEVISEPVDDDEEADLKKDKYIKQPKKKPAKKPAKKKAKTNEDDS
MIDDEEEEEEMPKKTKRASATAKKGKK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggatattagaagcttctttggaggtaaacctggaacctctacctctacacct
attcgagcaaaggagaacaaggaggaagattctaaaaaaaagaagagcaaaagtcgtaaa
atcattgaagatagcgatgatgaagaaccagtaaaaaatgaagagcctgaaggaaaggaa
acaaccgcggatgacttctttgcttcgagcaataaacccaagaccaaaccggcaaaatca
acccccatcaaatcaaatcactcaccacccgagacgaatacccgaacatcttctcgaaag
aaggcatctacaacctatcaagaaattaaagacgaggacgacttcgatgaggacgatgat
atatttgcagcagatgtgaaaaaagcaggcaagcgcaaggatgatggttatgtcgaagat
gatagcgatgatgaggtgctaccgaaacccaagagagttgtgtcgaggtcgaagcctgca
ccagccaaaaaggacaaagatattgaaatgatggatgtgggtgacgacgacgcttttatt
gtgcctgatgatgatgaggatgatgatatgatgataattgaaaagcccgcaaagaactct
gctgcgaatagcaagaagcgtaaatctgttgatttggaatccagtgacgaggaggatgtt
caacctaaaaagtccatcaaaaacaaaagctcaaagccacctccagcaaagaaaccccgt
gctcccgcaaagaaagcagcggctctagagagctcgagtatacaagcgatacttgacagc
attccaaccgtccgagccccgacccctccaccgaaagatgacagtgtcaaattcaagtgg
caacctggtggaggcggtaattctgccgctccaccagctgcaggttgcgcggagattcct
gaaggtgcagagaattgtttagcaggtttgactttcgttttcacgggggtgctcaacaca
atttcaagagatgagggaattgagctcgtcaagaagtatgggggtaaaatcactggtgcc
ccaagtagcaaaacaaattacgttgtacttggaagcgatgctggcccgagtaaactcagg
aaaataagggaattaaagataaaaagcgttgatgaagaagggctcttcgccattatcaaa
gccatgcctcctaacggtggcgatggcaaggctgcggagaagaataacgagaagaaggca
gctgaagagagaaagatccgacaagacgccgaggaaatggacagagaggagcgaaggaaa
gctgcagaagcggagaaagcggagaaggaggctcaaaggcttgctgcagcaaaaggaaaa
tcttctataccagcagctccccgcaaagcagtggtgccaacttcatcacaattgtggacc
accaagtatgcaccaacgcaaatgaatcaaatctgtggcaacaaaggtcaagttgaaaag
attcagtcttggcttaagggttggccaaatgcccacaagtacaatttccagaagagaggt
gcagatggactcggaggctacagagccattattatccatggtccacccggtatcggaaaa
acgactgcggcacatttggctgccaaacttgctggttatgatattttggagagaaacgct
agtgatgttagaagtaagaaacttgtcgaaactgggttgagtgaggtactgaacaatact
tcggttctgggttacttcgcaggcgatgggaagaatatcgataagactaagaagaagata
gtcctcattatggatgaagtcgatggtatgtcatctggagatcgaggcggtgtgggagct
ctcgcgaaaatctgcaaaacgaccgatacacccatgatattgatctgtaacgaccgcagg
cttccgaagatgaagccattcgattttgtgacatttgacatgccattcaagagacctacc
gttgatatggtccgttcacgtatcgctactatctgtcatcgagaaggcataaaactccct
gttcaagtcatcgatgcccttattgaaggaagcaacaatgatatcagacaaattatcaac
atgatatctactgttaagcttgatcaaacagccatggacttcgaccagggaaagcaaatg
tcaaaggcatgggaaaagcatgttgttctcaagccatgggacataacccatcaactccta
ggaggacatatgtttgcttccagtagcaaatctaccttgaacgataagattgagctttac
ttcaacgatcacgagttcacaccgctgatgatccaggaaaattatctaaacaccaaaccg
caattagctaatcgtgcagatacacccaaagagcacaaactaaaggtgctacaactcgta
gaccaagccgcagagagtatcagcgatggtgatttggttgatcggatgattcacggatcc
caacaacagtggtcacttatgcctacgcacgcagtcttcagtacagttcgaccggcaagc
tttatatctggttcaatgactggaagaaccaactttacatcttggcttggtaacaatagc
aagtacggaaagctctctcgttatgtgaaggaaattcaatcgcacatgcgactgcggtcc
tctggagatcgtcatgaaattcgtcaacaatatctaccagttctctgggataaactcatt
cgtcgactcgaagttgagggcagggactctgtggaagatgttattgatctcatggatagt
tatttcctaactagagaggactgggactacattttcgaactcggtgttggagaacaagat
atggaaggtgtcaaattggaaactcaaacaaaagccaatttcacaagatcctataatgca
cgctcccaccccgttccattcatgaaagcaagcaatgtcttccaacctacaaaagtcgct
gccgtaaaaccagatctagaagaagcattcgaggaagaagatgaaggtgaagtaatttcg
gaaccagttgatgatgacgaagaggccgatttgaagaaggataaatatatcaagcaacct
aagaagaagccagccaagaagccagccaagaaaaaggctaagactaatgaggatgatagt
atgattgatgatgaggaagaggaagaagagatgccaaagaaaacaaagagagcgagcgct
actgcaaagaaggggaagaaataa
DBGET
integrated database retrieval system
