Sclerotinia sclerotiorum: SS1G_00971 Help Entry SS1G_00971        CDS       T01071                                  Name (RefSeq) hypothetical protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism ssl  Sclerotinia sclerotiorum Pathway ssl03013   Nucleocytoplasmic transport ssl03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ssl00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     SS1G_00971    03015 mRNA surveillance pathway     SS1G_00971  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ssl03019]     SS1G_00971 Enzymes [BR:ssl01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      SS1G_00971     5.6.2.5  RNA 5'-3' helicase      SS1G_00971 Messenger RNA biogenesis [BR:ssl03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      SS1G_00971    mRNA cycle factors     Common to processing body (P body) and stress granule      SS1G_00971 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_11 AAA_12 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD UvrD-helicase Viral_helicase1 SLFN-g3_helicase NPHP3_N NAT10_TcmA_helicase AAA_22 PIF1 nSTAND3 ATPase AAA_25 AAA_16 AAA_10 nSTAND_NTPase5 PhoH Motif Other DBs NCBI-GeneID:  5494351 NCBI-ProteinID:  XP_001598882 UniProt:  A7E6P6 LinkDB All DBs Position Unknown AA seq 972 aa AA seqDB search MESAFAYVGNHLISDSAAAINAGADDLSNIDPEESLLYGQYGGHGGLGSSRLRSDDDDNE TEAFDDDDNESLASVPLDGMKTLGLRGLDDEKELPAHACAYCGIHSPSCVVKCLGCNKWF CSARGTATSSHIVNHLVRARHKEVQLHPMSTLGDTVLECYNCGIKNVFLLGFIPAKSDTV VVLLCRQPCASAPSSKDMSWDVSKWQPLIEDRSFLTWLVSLPTDAEQLRARHLTPPMIAK LEEMWKDNVNATLQDLEKAAGIDDDPAPVLLKYDDAYQYQNIFGPLVKIEADYDRKLKEA QSEDGLIIRWDYGLNNKHLASFILPKIELGDVKLAVGDEMRLKYKGELRPVWEGVGYVVK IPNNQSDEVTIELRKVGNDKSVPTECTHNFSADYVWKATSYDRMQFAMKTFAVDEMSVSG YIFHKLLGHEVAAAPMKIQMPKKFSVPGLPELNSSQINAVKSVLQKPLSLIQGPPGTGKT VTSATVIYHLAKVNGGQVLVCAPSNVAVDQLCERIHRTQLKVVRLTAKSREDVESSVGFL SLHEQVRMNDSNHELAKLTQLKSELGELSSQDEKKFKALTRAAEREILSNADVICCTCVG AGDPRLAKMKFRTVLIDESTQSAEPECMIPLVLGCKQVVLIGDHKQLGPVIMNKKAAKAG LDQSLFERLVKLGLKPILLNVQYPDTPMMFWSNLGNEEISASGTSYLNRTEASNVEKIVT RFFKAGVQPGDIGVITPYEGQRSYVVTSMQNAGSFKKEHYKEVEVASVDAFQGREKDFII LSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIAGSMMSSALDDVSSVHSSHLGGVGVG SAYPAGFGNFPLAGLDHWPGLDSRGSRANGQKGRGRGPESIAGESVAANGRGIGQGGVSL GANVHEGQKQTSLSQSDRLKQYVESGGRIADYKTGDAGSVFGTSSLLGGRRFDDDEKSVS TAFASQIGGGYD NT seq 2919 nt NT seq  +upstreamnt  +downstreamnt atggaaagcgctttcgcctatgttggaaaccacctaatatcagattctgctgctgcaata aacgcgggtgcggatgatctttcaaatattgatccggaagaaagcttgttatatgggcaa tatggaggtcatggtggcttgggatccagcagactaagaagcgatgatgatgacaacgag actgaagcattcgatgacgatgataatgagagtctggcaagtgttccacttgatggaatg aaaactcttggacttcgaggtctcgatgatgagaaggaacttccagctcacgcatgcgca tattgtggaattcactctccaagctgtgtcgttaagtgtttgggatgcaacaaatggttc tgcagtgcccgtggaactgcaacatcttcacatatcgtcaatcatcttgtccgcgcaaga cacaaggaagttcaattgcacccaatgtcaactcttggagataccgtacttgaatgctac aactgtggcataaagaatgttttcctactcggcttcattcctgcgaagagtgacaccgtc gtggtcctcctatgccgtcaaccttgtgcttccgctccgtcttcaaaagatatgagttgg gatgtatccaaatggcaaccattgattgaggatcggtcctttttgacttggctcgtctct cttcctacggatgcagaacaacttcgcgctcgacacctcacgccacctatgattgcgaag ttggaggagatgtggaaggataatgtcaacgctactcttcaagatttggaaaaggcagct ggaattgatgatgatcctgcccctgtccttctcaaatacgatgatgcctatcaatatcaa aatatctttggacctttggttaaaattgaggcagactacgatcgtaaactcaaggaagct caatccgaagatggattaattattcgttgggattatggtttgaataacaaacatctggcc agttttattcttccaaagattgagcttggtgatgtaaaactcgctgtaggtgatgagatg cgactcaaatacaagggcgagttgcgacctgtctgggagggtgttggatacgtggtaaaa attccgaacaatcaatctgacgaagtaactatcgaactccgaaaggtcggcaacgataaa tcagttccaacggaatgcacccacaacttttctgccgattatgtatggaaggcaacttct tacgaccgcatgcaatttgccatgaaaacttttgccgtggacgaaatgagtgtatcggga tacattttccacaaacttcttggtcacgaggtagctgcagctccaatgaaaattcaaatg cccaagaaatttagcgttcctggtctaccagaattgaacagcagtcagatcaatgccgtc aagagcgtattacaaaagcctttgagtcttattcaagggcctccagggactggaaagaca gtcacatccgctacagtcatctaccatttggccaaggtcaatggtggtcaggtccttgta tgtgctccgtctaacgttgctgtcgatcaactctgtgagcgtatacatcgaacccaactc aaagtcgttcgtcttacagccaagtcccgtgaagacgtcgaatcatctgtcggattcctg tctttgcatgagcaggtccgcatgaatgacagcaatcatgaattggctaaacttactcaa ttgaagagcgagttgggcgaattgtccagtcaagatgagaagaagttcaaagcattgaca agggcagccgaacgtgaaattttgagtaatgcagatgtcatttgctgtacttgtgttgga gctggagacccaaggcttgccaagatgaaattcaggacagtccttatcgacgaatctact cagtccgcggaaccagaatgtatgattccacttgttctaggatgcaagcaagtagttttg attggtgatcacaaacaattgggacccgtcatcatgaacaaaaaggctgcaaaggcaggt ctggatcagtcacttttcgaacgtctggtcaaacttggcctcaaacctattctactcaat gtgcagtatcccgatacgccgatgatgttctggtccaatctcggtaatgaggaaatttct gcttctggcacgtcttatctcaacaggactgaagcctcaaatgtcgagaagattgttact cgttttttcaaggctggagtacaacctggagacattggcgttatcactccatatgaaggt caacgaagttatgtcgtaacttctatgcaaaatgcgggttcctttaagaaagagcactac aaggaggttgaagttgcttctgtggacgccttccaaggacgggagaaagatttcatcatc ctttcttgtgtcagatctaatgaccatcaaggtattggtttcttgagcgatcctagacgt ctcaatgtcgctctcacacgtgctaagtatggccttgtcattgctggttccatgatgagt tctgctttggatgacgtttcttcggtacactcatcccatctcggcggtgtgggtgttggt tctgcctatcccgcaggctttggtaacttccccctcgctggccttgaccattggcccggg cttgattcacgaggatcacgtgccaatggtcaaaaaggacgtggacgtggacctgagagc atcgccggagaatctgttgctgctaatggcagaggtattggtcaaggtggcgtcagtctt ggtgccaacgtgcacgaaggacagaaacaaactagtttaagtcagtctgaccgcttgaag caatatgttgagtctggcggtcgtattgctgactacaaaactggcgatgccggtagtgtc tttggcaccagctctttgttgggtggtcgtcgatttgatgacgacgagaagagtgtttct actgcattcgcaagtcaaatcggaggaggttatgactga

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