Sclerotinia sclerotiorum: SS1G_01039
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Entry
SS1G_01039 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssl03041
]
SS1G_01039
Enzymes [BR:
ssl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SS1G_01039
Spliceosome [BR:
ssl03041
]
Complex C
Other components
Complex C specific factors
SS1G_01039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
cobW
AAA_19
AAA_30
AAA_23
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
5494766
NCBI-ProteinID:
XP_001598949
UniProt:
A0A1D9PY48
A7E6W3
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MADFDLSSNFIPALHKPSSLLPIAQHRESLLYLIESYPVTIVIGHTGSGKTTQIPQFLEK
AGWCANGKQIAVTQPRRVAATTVAIRVAEEVGCEVGKEVGYSIRFEDVTSAATKIKFLTD
GLLLREALVDPLLSRYSVIMVDEAHERSLSTDILLGVLKKILKKRPNDLRIIISSATLQA
EDFLNFFSNDPEVEAKPNVDDAMTLDDLIAQGSSSTNGSKNDGKIGQIISLEGRMYPVDI
LYLENPAEDYLERAIDTVFDIHTKEPDGDILVFLTGREEIDKAVQAISERAASLHPRSQA
LMPLPLYAGLSTEQQMFVFELAQENTRKVIFSTNIAEASVTIDGIIYVVDCGFVKLRAYN
PITGIETLTATPISKASATQRSGRAGRTKPGKCFRLYTEANFQALEEATVPEIQRSNLAP
IILQLKALGIDNIVRFPFLTSPPAELIIRGLELLYSLGALDTYAKLTKPLGTRMAELAVE
PMMAKTLLSASSFNCLSEILTIAAMTSVGGNIFYNDYDEKKAMETAKRKFAVEEGDHITL
LNIYQSFITKGKKQPRFCHDNYLNFKALSKAISIRSQLKRYLERFGISIDETLSSSSNPN
MLSVGGPDKSEQIRRCLTTGYFAHAAKMQPDGTFRNIGGGTILHAHPSSLMFNRKCEWVV
FSEVVELGAKVYIRDLSRIEKGWLVEYAPEFYKMGM
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggccgactttgatttgtcatcaaactttattcctgctctccacaaaccttcttcatta
ctaccaatagctcagcatcgggaaagtcttctctatctcatcgagagttatcctgttact
attgtaattggacatacgggttcgggaaaaacaactcaaatacctcaatttcttgaaaaa
gcaggatggtgtgcaaatgggaaacagattgctgttactcagcctcgtcgagtagctgca
actactgtagcaatcagagttgcagaagaagtcggatgtgaagtaggtaaagaagttgga
tattcaattcgattcgaagatgtcacatcagctgcaaccaagataaaatttttgaccgat
ggacttcttctacgagaagctttagttgatcctttattatcacgttattccgtcattatg
gttgatgaagcccatgaacgttctttgagtactgatattcttcttggggttcttaaaaag
attttgaagaaacgtccaaatgatttaagaatcattattagtagtgcgactcttcaagct
gaagattttctgaatttcttttcaaatgatccagaagtggaagcgaaacctaatgttgat
gacgcgatgactcttgatgatttaatcgctcaaggtagtagttcaacaaatggttccaaa
aatgatgggaaaattggacaaattattagtttggaaggtagaatgtatcctgttgatatt
ctttacctagaaaatccagctgaagattatctggaaagagctattgatacagtatttgat
atccataccaaagaaccagatggagatattctagttttcttaactggaagagaagaaata
gataaagctgtacaagcaatatcagaacgtgcagcaagtttacatccaagatctcaagct
cttatgccacttcctctttatgctggtctttcaactgaacaacaaatgtttgtttttgaa
ctagctcaagaaaacactagaaaggttattttctctacaaatattgcagaggcttctgtc
acaattgatggtatcatctatgtagtcgattgcggttttgtaaaacttcgagcttataac
ccaatcactggaattgaaacattaacagcaactccaatctctaaagcatcggcaacccaa
agatctggtcgagcgggtcgtaccaaacccggaaaatgttttcgtctctacacagaagca
aactttcaagcccttgaagaagcaaccgttcctgaaattcaacgatcaaatctcgcaccc
ataatccttcaactcaaagctctaggtatcgacaatatagtccgtttcccattccttact
tctccaccagccgaattaataatccgtggactcgaacttctctattctctcggtgccctc
gacacttacgccaaacttaccaaacctctcggaacacgcatggctgaactagcagtcgaa
ccaatgatggccaaaacacttctatcagctagttccttcaactgtctttccgaaattctt
acaattgccgccatgacatctgtaggaggaaatatcttttataatgattacgatgagaag
aaagccatggaaaccgctaaacgaaaattcgccgtcgaggaaggtgatcatatcactctt
cttaacatctaccaatcattcatcaccaaaggcaaaaaacaaccacgattttgtcatgat
aattatctaaacttcaaagccctttcaaaagcaatcagtatccgatctcaattaaaacgc
tatctggaaagattcggcatctcaatcgacgaaactctctcatcctcttcgaacccaaac
atgctctcagtaggcggaccagacaaaagtgaacaaattcgcagatgtttaaccacggga
tattttgcacatgcggcgaaaatgcaaccagatggtacatttagaaatataggaggagga
acaatcttgcatgctcatcccagtagtttgatgtttaatcgcaagtgtgagtgggttgtt
tttagtgaggtggtggagctgggtgcgaaggtttatattagggatttgagtaggattgag
aagggttggttggtggagtatgcgccggagttttataagatggggatgtga
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