KEGG   Sclerotinia sclerotiorum: SS1G_01423
Entry
SS1G_01423        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SS1G_01423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssl03041]
    SS1G_01423
Spliceosome [BR:ssl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    SS1G_01423
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd NBCH_WD40 PRP4 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_WDR19_1st WD40_RFWD3 WDR54 Beta-prop_Vps41 Beta-prop_RIG_1st Beta-prop_DCAF4 Beta-prop_DCAF12 eIF2A PROPPIN
Other DBs
NCBI-GeneID: 5493707
NCBI-ProteinID: XP_001597229
UniProt: A0A1D9PTS9 A7E7Z5
LinkDB
Position
Unknown
AA seq 514 aa
MHPSRQAYVEEAKEDTGIDLADVPLDRDYDMPSATAGIAPERASAILSQFDRKRRAAAIA
VPTDDGRVRARLREMGEPVTLFGEGPGDRRDRLRQLLTIESEMKAEENGEVDDGDVEMGE
GNKDEEAEEEFYTRGTKELLDARIDIAKFSLPRAKKRIEIQRIEKDIPLRTHIKFRQGIK
ERLKDFELQGSQTAGERPVSVVRISPNGELVAAGNWGGGIKVLGIPDLEVKKSLRGHTDR
VGGISWAPGATIEGSNVSPGSVNLASGGAEGKVHLWNLEQDTPVSTLAGHNQRVCRVEFH
PSGKYVASASEDTTWRLWDVESTTELLLQEGHSRGVFCLNFNGDGSLLASAGMDSIGRIW
DLRTGRTVMILDGHIRPIYALDWSTDGHRVLSGSGDGWIKCWDVRKVASTGGVGAHRSVV
SDLRWFKGTDAMSPPEKDEKGIVQPRKTGTFFVSCGFDKDVNIFSADDWALVQSLSGHTG
NVHSCDVGADGKWIVSGGYDRTVKLWGRNNGEGI
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgcatccttcaagacaggcgtatgtggaggaggccaaagaagatacaggtatagatctc
gcagatgtccccctcgaccgcgactatgacatgccctctgcaacggcaggtattgccccc
gagcgcgccagcgcaattctttctcaattcgatcgcaaacgtcgtgcagctgctatagcg
gtgcctactgatgatggacgcgtgcgcgcacgacttcgagaaatgggggaacctgttacg
ttgtttggggaaggaccgggtgataggagagatcggttgcgacagcttttgacgattgag
agtgagatgaaggcggaagagaatggggaggttgacgatggtgatgtggagatgggagag
gggaataaggatgaggaagcggaggaggaattttatacgaggggtacgaaggaattacta
gatgcgaggatagatattgcgaagttttcgttgccgagggcgaagaagaggattgagatt
cagagaattgagaaggacattccgttgaggactcatattaaatttagacaaggtatcaag
gagagactaaaggatttcgagcttcagggaagtcaaacggctggagagagaccagttagt
gttgtgaggatttcgcccaatggagaattggtcgctgcaggcaattggggaggtgggatt
aaagtgcttgggataccagatttggaagttaagaagtcgcttagagggcatacagatagg
gtgggtggaatttcatgggcaccaggtgctactatagagggatccaatgtctcgcctggt
agtgtcaatttagcatcaggaggagcagaaggaaaggttcacctatggaacctggagcaa
gatacacctgtttcgacattggcgggacacaaccagagagtttgccgagtggaatttcat
ccatcaggtaaatacgtcgcatctgcatccgaggatacaacatggagattatgggacgtt
gaaagcacgaccgaacttttacttcaagaaggccattcaagaggagtattctgtcttaat
ttcaacggcgatggatcacttctagcaagtgcaggtatggatagtataggacgtatctgg
gatctgcgaaccggtcgtacagttatgatactagatggacacattcgacccatctacgca
ctcgactggtccaccgatggccatcgcgttttatccggatctggggatggatggatcaaa
tgctgggatgtgaggaaagtcgccagtacgggcggagtaggtgcacatcgtagcgtagta
tctgatttgagatggttcaaaggcacagatgcgatgtctcccccggaaaaagatgagaaa
ggtatagtgcaaccgaggaagacaggaacattcttcgtctcatgtggcttcgataaggat
gttaatatcttttctgcggatgattgggctttggtgcagagtttgagtggtcatacgggt
aatgtgcatagttgtgatgtaggggcagatggaaaatggatcgttagtggtgggtatgat
agaacggttaaactatggggaagaaataatggagaggggatttaa

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