Sclerotinia sclerotiorum: SS1G_01554
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Entry
SS1G_01554 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12877
protein mago nashi
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
ssl03015
mRNA surveillance pathway
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_01554
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_01554
03015 mRNA surveillance pathway
SS1G_01554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_01554
03041 Spliceosome [BR:
ssl03041
]
SS1G_01554
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SS1G_01554
Spliceosome [BR:
ssl03041
]
Complex C
Other components
EJC/TREX
SS1G_01554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
5493273
NCBI-ProteinID:
XP_001597360
UniProt:
A7E8C6
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MNLEFDFRVLGDGRSASARYANNSNYRNDSLIRKEMNISSLLVEEIKRIIKTMHAAHDFN
REDDSKWPQKNKDGRQELEIKIGSEVISFETAKIGSLVDVTESQDPEGLRVFYYLVQDLK
ALVFSLIALHFKIKPI
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaattcgactttcgagttttgggcgatggaagaagcgcatctgcacgttat
gccaacaattccaattatcgaaacgattccctgatccgcaaagaaatgaacattagctcg
ttattggttgaggaaatcaagaggatcatcaaaaccatgcacgcagctcatgatttcaat
agggaagatgatagcaaatggcctcagaagaacaaagatggacgccaggaattagaaatc
aaaataggcagcgaggttatttctttcgaaactgccaaaattggatctctcgttgatgtc
acggaatctcaagatcctgaaggtcttcgcgtgttctactatcttgtgcaagatttgaaa
gcgttggtgttttcattgatagcacttcacttcaagatcaagcctatttaa
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