Sclerotinia sclerotiorum: SS1G_01637
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Entry
SS1G_01637 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_01637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_01637
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SS1G_01637
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
5493247
NCBI-ProteinID:
XP_001597443
UniProt:
A7E8K9
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MSLFGNTNQNKPSLFGNVNTAPQTAGASTGGLFGGLGTATSQAQSTGGMFGGMGATSQPQ
TSGGLFGTATTKPQQQSGTGTGGLFGGLGTTPATQSQQTSGLFGATTQPQTTSGTTGGLF
GGALAQPQQPQQNTSGLFGNTTTQPNPSASMFAPTPQPQPLSQSRQQNGTSGAYFDAILE
KSRKRAHDEDSLGLQLGLGDIRQRMKRLAPTTKDGPVDGRAHYLLAASGVDPGAALKDLN
LFTAATGRLDKAPPPEPPVDADVEAYLTRLETQTTMSMISEGLARSVRDFDDFLEENVAM
EWSAQRKRIYEHFGIKPRREQGAGPSAESFAATTTEPTGGFGRSRRGKGLAPGASKGPGI
PRASVFGKSSMQRSVIGAVAPGGAGNRALFTDMEKTDTNASPQGPSDRFLREKQARYIEK
VQNLNGARLKNLHYPIAHEFSAVVGQGGEQHSADVYRAYRCLMEIVGEDPDPDRLQLPGA
VKQRQFAAAYLDDNTNSAQAADLRKRILGGSLRYLEKEFFENVEAMVAKNPREALVGGRP
TPLTKIKGYVRLRSARKDLVTDNSALQIFENDYVWAVIFYLLRSGHVEEANAYVQANRDA
FRVIDRNFMFYIADYANSPDRKLRHDLQDRIHNEYNQRNRIAPDNSVDPFRMACYKVIGR
CELYIRALDQNIVQNQDDFVWIQFVLAREANRVDEIASDAYGLVNVQKTFKDIGARMFSK
GNENSGPFSVYFVLLVLSGLFEDAVDLLYRHSISDCIHFATSLAFYGLLRVSDPDVAEGG
FISYTIRQQPQIAFGLMIGFYTAEFRAANVSAAVDYLTLICLNSDLKGDVGSKQVALCHE
ALQELILESREFALLLGDIRQDGKRIQGVIEERLALINLSSADDFMRTVTIQAGSVADDN
GRTTDAVLLYHLAEEYDNVVNILNRALSEAIAVPIGHSPMRLQPLKPRPADRSGKPAHAS
LSLTSVDDPVELATIMTNLYSNNRMYLNKIKQENRAACEALLNISRAKEFVENREWASAL
DVVRNLDILPLNAEGNPSEIRSYATKFSSLPQEVANTIPSLLMWTILCCNSQRTSLMNAQ
YGGNEGTRRLMVAQLKQQNMDLTTYTSQLRYRFPASLHEALAKAQSE
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttcgggaataccaatcaaaacaaaccatcactttttggtaatgtgaacaca
gcaccgcaaacggcaggagctagtacgggaggtctttttggtggtctaggtactgctact
agtcaggcacaaagtacaggaggaatgtttggtggaatgggagctactagtcaaccacaa
acgagtggtggtttatttggaacagcaacaactaaacctcaacaacaatcaggaactgga
actggcggtttatttggaggacttggaacgactccagcaacacaatcgcagcaaacaagc
ggtctttttggtgcgactacacaaccccaaacgacaagcggaacaactggaggtcttttt
ggtggtgctttagctcaaccccaacagccgcaacagaatactagtggacttttcggaaac
acaactacacaacccaacccttcagcatcaatgttcgcgcctactccacaacctcagcct
ctctcacaatctcggcaacaaaatggaacgagcggtgcctattttgatgccatattggag
aagagccggaagagggcacacgatgaggactctttaggtttacaattaggcttgggggat
atacgccagcgcatgaagagactagctcctacaactaaagatggccctgttgatgggaga
gctcattacttattggcagcttctggcgtggatccaggtgctgcgctaaaggatttaaac
ttgtttaccgctgcgacaggaagactcgataaagcgccacctccagaaccacccgttgac
gcggatgtggaggcatacctgacacgactggaaacgcaaactacaatgagtatgatatca
gaaggattggcacgatctgttcgtgatttcgacgacttcctggaggaaaatgttgccatg
gaatggagcgcacagcgcaagaggatatacgagcatttcggcatcaagcccagaagagaa
cagggagcaggaccttcagcagaaagttttgcagctacaactacggaacccacgggtggt
tttggtcgatcaagacggggtaaaggacttgctccaggagcatctaaaggacctggaatt
ccacgggctagcgttttcggaaaatcaagcatgcaaagatctgtcattggagctgttgcg
ccaggaggggccgggaaccgagcactatttactgatatggagaagacagacacgaatgcg
tcgccccaaggccctagtgatcgattccttcgagagaagcaggcccgatacatcgaaaag
gtccaaaatctcaatggtgccagattgaaaaatcttcactacccaattgcccacgaattc
tcggctgtggtaggtcaaggtggtgaacaacattctgcagacgtttacagagcgtatcga
tgcttgatggaaattgttggggaagatcctgatccggatagactacaacttcccggtgcg
gtcaaacagaggcaatttgcagctgcttatctagacgataatacgaattccgcgcaagcg
gcagatctgagaaaacgaatacttggtggatcacttcgatatctcgagaaggaatttttc
gagaacgttgaagccatggttgccaaaaatcccagggaagcacttgtgggcggtagacct
actcctcttacgaaaatcaagggttatgttcgccttcgttcggcccgcaaagatcttgtt
acggacaattccgctcttcagatttttgagaatgattatgtgtgggctgtaatcttttac
cttttaagatctggccatgttgaagaagccaatgcttatgtccaagctaatcgcgacgca
ttccgtgtgatcgatcgcaactttatgttttatatcgcagattatgccaatagcccggat
agaaaattacggcatgatcttcaagatcgtattcacaatgaatacaaccagcgaaatcga
attgctcctgataattctgtcgatcctttcagaatggcatgctacaaggtaatcggccgg
tgcgaactctatattcgcgctctggatcagaacattgttcagaaccaggatgactttgtc
tggatacaatttgtccttgcccgtgaggcaaaccgtgttgatgagatcgccagcgacgca
tatggactcgtcaacgtacaaaagacattcaaggacattggtgctagaatgttttccaaa
ggcaatgaaaatagtggtccattcagtgtgtactttgtgcttctggtactttcgggctta
ttcgaggacgcagtcgacctcctttatcgccatagtatttccgattgtattcattttgca
acgtcacttgccttttacggtttacttcgagtctcagatccagatgttgcagaaggtgga
ttcataagttacactataagacaacaacctcaaatagcatttgggttaatgattggattc
tacactgcagaattcagagctgcgaacgtcagtgctgctgtggattatcttaccctgatc
tgccttaatagtgatctcaaaggcgacgttggttcaaaacaagttgcattgtgccacgag
gctcttcaggagctgattttggaaagcagagaattcgctttgttgctcggtgatatccgt
caagacggaaagcgtatacaaggagttatcgaagagcgcctggcgttgatcaatctaagc
agcgcggatgatttcatgagaactgttacgatacaggcaggaagtgtcgcggatgataat
gggcgtactactgatgcagttttgctttatcacttggcggaagagtatgacaatgttgtt
aatatcctcaacagagcccttagcgaagctattgctgtacccataggccatagtcctatg
cgattacagccgcttaagccaaggcctgcggatagatccggaaaacccgcccatgccagt
ctcagtcttacctcagttgatgaccccgtcgaattggctacgataatgacgaatctttac
tcaaataatcgcatgtatctcaacaaaatcaaacaggaaaaccgtgctgcttgcgaagct
ttattgaatatcagtcgtgccaaggagtttgttgagaacagagaatgggcctcagcatta
gatgttgtgagaaatcttgatattctccccttgaacgctgagggcaatccaagtgaaata
cgaagttatgccaccaaattctcatctcttccccaagaggttgcaaacactatacccagt
ctattgatgtggacgatcttgtgttgcaatagtcaaagaacctctcttatgaatgcacag
tatggaggaaatgagggtacgagacgtttgatggttgctcaattgaaacaacaaaacatg
gacttgacgacatataccagtcaattgagataccgattcccagcctctcttcatgaagct
ttagcaaaggctcaatctgagtag
DBGET
integrated database retrieval system
