Sclerotinia sclerotiorum: SS1G_01904
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Entry
SS1G_01904 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssl04131
]
SS1G_01904
04121 Ubiquitin system [BR:
ssl04121
]
SS1G_01904
Enzymes [BR:
ssl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SS1G_01904
Membrane trafficking [BR:
ssl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
SS1G_01904
Ubiquitin system [BR:
ssl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
SS1G_01904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
zf_RING_Vps8_fungal
VPS18_RING_C
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
5494139
NCBI-ProteinID:
XP_001597708
UniProt:
A7E9C4
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MADPRNTSGGIDNGGGGRHLDATGPREVVYCHQCEDEWYKDEHGLVDPNSDPRRGMDNFR
NISPLRDLDDHNPWADDSDPEEADIEEHITRGPHGSVLISQTIRTRRPVPFGGNFNTITG
EMRRMRSPGGAAGDDDAMRDFQSILGNLMGPNLRSSRTGRSGNDDLFPRAEEFHTGGGGS
GFGMGGGRGPHIAGGRYTFEGRFGNGRLRPRDANSPQAQGAPVEDLATQSSTFSAPYYME
KFRLYKIWNADLFLIFVSIFVLVSLNTNFLSILISHLFAQIGAVPAPGTPGEDDEPRRGM
PFPGVVGLPGLLQTLFSHQNAVHGDAVYSQEAFDRIMSQLMEQHQQSNAPGPASPAAISA
LPKKALDEKMLGPEGRGECSVCMDDVFLATEVVVLPCKHWFHEACASAWLSEHNSCPICR
KGIEAEESSSSRHAHTARPSNSTTPQSASSPSSRRARLSRLNSEQNDLMARNEARLDFLR
NSHLTGPSSASPLSERREAERMERREAERHAERVAEQAIEDSIFSNSSRSEHMPGIFPGS
NASTPTSTLHRRDSGLSTGTNEPRRGIGSSRQSSSRDRSRSRRSERSESDSSVRGEGNGN
GNGNGNGNGGFAGWLRDRWSRRQE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcccagaaatacaagtggtgggattgataatggtggcggaggaagacatttg
gatgctaccggtcctagggaagtggtttattgtcatcaatgtgaggatgagtggtacaag
gatgaacatggcttagtggatccaaatagtgaccctcgtcgtgggatggacaattttcgt
aatatctcgccattgcgcgatcttgacgaccacaacccttgggccgatgactcagatccg
gaagaagcagatattgaggaacatattacacgtggcccacatggctctgtattgatatcg
caaacaataagaactagaaggccagtaccgtttggaggaaacttcaacacaattacgggt
gagatgcgtcgaatgcggagcccaggtggcgctgcaggagatgatgacgcaatgcgagat
ttccagagtatactggggaatctaatgggtcctaatttgagatcaagtcgcaccggtcga
tctggtaatgacgacttatttccacgcgctgaggaatttcacactggtggtggtggatct
ggctttggaatgggtggcggtcgaggacctcatattgccggtggtcgttacactttcgag
gggagatttggaaacggtcgtttacggccaagagatgcaaacagcccccaggctcaagga
gcacccgttgaggatttggctacgcagagctcaaccttttctgctccctactacatggaa
aagttcagactatacaaaatctggaacgcggatcttttcctaatcttcgtctccatcttc
gtgctcgtctcgcttaataccaatttcctttctatactaatctctcatttgtttgctcaa
ataggtgcggtgcccgcacctggaacacctggtgaagatgacgagcctcgccgcggtatg
ccttttccgggtgttgtaggcttaccaggacttcttcaaacacttttcagccaccaaaat
gcagtacatggcgatgctgtctattcgcaagaggcattcgatcggatcatgtctcagctg
atggaacagcatcaacaatccaacgcgcctggccctgcctctccggccgccatctcggca
ctcccaaagaaagctctggacgaaaagatgcttggtccggaaggcagaggcgaatgcagc
gtttgcatggatgatgtatttcttgctactgaagttgtcgtactcccttgcaagcactgg
tttcatgaagcttgcgccagcgcctggctcagcgagcacaacagctgtcctatctgtcgc
aaaggcattgaagccgaagagtcgtcctcgtctcgtcatgcccatactgctaggccaagc
aattcaacaactccacaatccgccagttctccaagtagccgccgtgctcgtctttctcgt
ctgaattcagaacaaaatgatttgatggcccgaaacgaagctcgtttggattttctccgt
aatagtcacttaacaggcccttcttcagcatctcctttatcagaaaggagggaagcggaa
agaatggaaagaagggaagcggaaagacatgcagagagagtagcagaacaagccattgaa
gatagtatattttctaattcttctcgaagcgaacacatgccaggtatatttccaggtagc
aatgcatcgacacctacgtcgacattgcacagaagagattcgggcttaagtacgggtacg
aacgagccacgaagaggaattggaagttcccgtcagagttcatcgagagatagatcaagg
agtcgaaggagtgaaaggagtgaaagtgatagctcagttaggggagagggaaacggaaat
ggaaatgggaatgggaatggaaatggggggtttgctggatggttaagggatcgttggagt
aggaggcaggaataa
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integrated database retrieval system
