Sclerotinia sclerotiorum: SS1G_02095
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Entry
SS1G_02095 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K11595
chromo domain-containing protein 1
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssl03036
]
SS1G_02095
Chromosome and associated proteins [BR:
ssl03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
SS1G_02095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chromo
zf-CCCH
zf-CCCH_3
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
5493608
NCBI-ProteinID:
XP_001597899
UniProt:
A7E9W5
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MSSKKANTKVFSSLEEDEISKLLLESTDDEEQYPSDHEFTVERILAQKSEDGQQLYLIRW
AGFPEEESSVNTHHIKTHPEYTANIYISQWEPRRNILGKPILDAWKSRQSRELEGLDTPY
DTRKLEALKRRVEDGKLRRRRLRREKRKRQGIVVSPHDSDADAGEEESTVLRQNVGSPTP
DGKRNPERQQQVQATKKPEGPVQNDSDLSSDEPLFVNQQQTAKLDASSSKTAPRPEEESQ
KQAASKPRAADTLEIAAAKKSTSSRGTPKIRGGGAMRGGSSLYSQNVFISGKAPRKQKAS
LIEAAADSSKDQRHFKTRHILRKVELAGRTMAEKAPDLAFIPGGLINPSKASSAQKPEAL
RRTSSAPQNEEENRRVPPATPNHEQQEDSHGPAPHPAEMSWEDVQHIPYEQRTRCFFTTQ
PQGCYNSHCKYLHVDDPRLPVVSAPDGWFDSQKKICFFYNLDGNCRRGDACRDLHNSNSN
IPVRSPPPGWVPPASSGKTMSRKSQAPHSVGGPKMVCYYWYSENNCKKGDECKLAHSNDN
DFPVATKPGSIPLKSIPCKYWNQGHCQLDRNCYFKHEQAQYSPVVYTSHVDPDVVDLGIS
RERGSQRPLHNARTTPVPGDDDAIDVEMNAAPDLPPLERNHQEAEQLPFDNDLMNGEVQS
AGAKIKAVTFGPQAQPTNLDFTSLPTDASDWKKAFVSAETLHFEQICTVHDFKSKYGHIQ
QYTYWQQNISTDSTDQAGCHMVKNIAEYLCLWISGLACVSDNYIILLYPVAVEEWKYLDV
APSLPTDAKLRYLVFGTQSHILSSVESSKINQNSSTDLSYRDMMMKSFHHLDYEKLIMDQ
KSKDQKVKDQKVKRLIFNFCLIFPASNQSTAELIASWLKSCSIYSKIYNYQKPGCWNHFR
KNVNAGAVLIHSSALSLISDTDLVHGMTTEGMNYTFWCIQDSTSKMPFSHITQKPELGQI
VTKRLLPLGYAILLTPSFLVAEPVMTLNFLKWYQKKLKSSINGSIRVLCCHELPNFLMEL
SISKVEEQQELMRNLSGDPSMLAKLSAKGLSHEQCEARLDLYWLLCDMLRKDLPANLSPF
DCDPSEEESRSPLLFAPPSIDQNDEKKLVAWFAGWAYAHLDKYRRFYVVGSGKSKKSVND
PVRMIPEKDIFPQNSKAFREGGALAWARRGRVPFPIATNLEPSNINVVQSQEVEAELKEF
KFDLTDQWYPEWRRNTGEGQSTNHITEYRWDLTVAYSAFSGWFFDS
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaaaaaggcgaacacgaaggtcttctcctcacttgaagaagacgaaatttcc
aaattactattagaatcgacggatgatgaggagcaatatccttcagatcacgaattcacg
gtcgaacgaattttggcccaaaaatcggaagacggtcaacagctgtatctgattaggtgg
gcgggatttccagaggaagaatcatctgtaaatactcatcatatcaaaactcatcctgag
tatactgctaatatttacatctcacagtgggagccgagaaggaacatattgggcaaaccc
attcttgatgcttggaaatcacgacaatctcgtgaacttgagggcttggatacaccatat
gacaccagaaaactcgaagctctaaaaaggagggtcgaggatggtaaattacgacgtcgt
cgtttgcgacgtgaaaagaggaagcgccagggtatagttgtctctcctcacgactcggat
gcagatgctggcgaagaagagtctacagttctacgtcaaaatgttggctcacctacaccc
gatggtaaaaggaatcctgaaagacagcagcaagttcaagctacgaaaaaacctgaggga
cctgtacaaaatgactcggacttatcgtctgatgaaccgctgtttgtcaatcaacaacaa
acggcaaaattggatgcctcatcttctaaaactgccccccgaccagaggaggaatcacag
aagcaagctgcttcaaagccaagagccgctgataccctggagatagcagccgccaagaag
tctacatcctctagaggtacaccaaaaattcgaggaggaggtgccatgcgcggaggttct
tctctatactcacaaaatgtattcatcagtggtaaagctcccagaaaacaaaaagccagt
ttgattgaagctgctgcagattcatcaaaagaccagcggcatttcaaaaccagacacatc
ctcagaaaagtggaactggctggtagaacgatggcggaaaaagcaccagatcttgctttt
atccctggtgggttgatcaatccttcaaaagcttcatctgcgcaaaaaccagaggctctt
cggaggacttcatctgctccacagaacgaagaggaaaatcgaagagtgccaccagctacg
ccaaatcatgagcagcaagaagactcccatggacctgctccgcacccggctgaaatgtca
tgggaggacgtacagcatatcccgtatgagcaacgaacaagatgcttcttcactacccag
ccacaagggtgctataatagtcattgcaaatatcttcacgtcgacgatccccgacttccc
gttgtctcggcccccgatggatggtttgactcacagaaaaaaatctgtttcttctacaat
ttagatgggaattgccgacgtggtgacgcatgtagagacttacataattcgaacagcaat
atcccagtgaggagtccgccgcctggatgggtaccgccggcctcgtctggcaaaaccatg
tcaagaaaatcccaggcgccccatagtgtaggtggtccaaaaatggtctgctattattgg
tactcggagaataattgcaagaaaggggatgaatgtaaattagcccattcaaacgacaat
gattttcccgtggcaacgaaacctggttctataccattgaagtctattccttgcaagtat
tggaatcagggccattgccagttggataggaattgttatttcaagcacgaacaggctcaa
tatagtcccgtagtttatacgagtcatgttgacccagacgtagtcgatctgggaatttca
agggaaagaggttcacagcgcccactgcataatgcaagaactactccggtacctggtgac
gacgatgcgatagatgtcgagatgaacgcagcgcctgatctccctccgcttgagcgaaat
catcaagaggctgaacagttaccttttgataatgacctgatgaatggggaggtacaaagc
gcaggtgccaaaattaaagcagtcacgtttggtccacaagctcaacctaccaacctcgac
tttacaagccttccgacggatgcttcagattggaaaaaagccttcgtgagtgcagagact
ctacatttcgaacaaatctgcacggtgcatgatttcaagtcaaaatacggtcacattcaa
caatacacctactggcaacagaatattagcaccgactccactgaccaagccggatgccat
atggtcaaaaacatagctgaatacctctgcctatggatatctggtttagcatgtgttagc
gacaattatatcattctactttatccagttgcagtcgaagaatggaagtatttagatgta
gcacctagccttcctaccgatgctaagctgagatatttggtatttggaactcagagccat
atactaagttccgttgaatcttcgaaaatcaaccaaaattcatcaacggatctttcgtac
agagatatgatgatgaaaagtttccatcatcttgattacgaaaaactgataatggatcaa
aaatctaaggaccagaaagtcaaggaccaaaaagtcaagagacttatcttcaacttttgt
ttgatatttcctgcgtcgaaccaatctaccgcggaattgatagcatcatggcttaagagc
tgctcgatatatagcaaaatttacaattaccaaaagccaggatgctggaaccacttcagg
aaaaatgtcaacgctggagctgtactaatacactcatctgcgcttagtctgatttctgac
acagacctggttcatggtatgacaacagaagggatgaattacacattttggtgcatccaa
gatagcacatcgaagatgccgttctcccacatcacccagaaaccagagttgggccaaatt
gtaacaaagcgcctgttgcctttaggatatgccatacttctaacaccaagtttcttggtt
gcagaaccggttatgacacttaacttcttaaaatggtatcagaaaaagctcaaaagctcg
ataaatggctcaattagagtattgtgctgccacgaactgccaaatttcctcatggaactt
tctatttccaaggttgaggagcaacaagaactcatgagaaacctcagtggcgacccatca
atgcttgctaagctaagcgcgaagggattaagccacgaacagtgtgaagcgagacttgat
ttgtattggcttctttgtgatatgctccgcaaggatctacccgctaacctctccccattc
gactgtgatccatccgaggaagagtcgcggagtccattactttttgcccctccgtctatt
gatcagaatgatgagaaaaagctagtcgcttggtttgcaggttgggcctatgcacatctg
gacaaatacaggcgattttacgtcgttggttctgggaaatccaaaaaaagtgttaatgat
ccagtgagaatgattccggaaaaggacatcttcccgcaaaattccaaggcttttcgagaa
ggcggcgcattggcttgggctaggcgaggaagggtgccatttcctattgctactaatttg
gaaccatctaacatcaatgtagttcaatcccaggaagtggaagcagaattgaaggaattt
aaatttgatctcacggaccaatggtatcctgagtggaggagaaatacgggtgaaggacag
agcacaaatcatatcacagaatatcggtgggatctgacggtggcatactctgcctttagt
ggttggttctttgattcatag
DBGET
integrated database retrieval system
