Sclerotinia sclerotiorum: SS1G_02222
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Entry
SS1G_02222 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12385
Niemann-Pick C1 protein
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
SS1G_02222
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
SS1G_02222
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssl02000
]
SS1G_02222
Transporters [BR:
ssl02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
SS1G_02222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
MMPL
Folate_rec
Motif
Other DBs
NCBI-GeneID:
5492453
NCBI-ProteinID:
XP_001596006
UniProt:
A7EA90
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MTALVAGEAYTLKHEAGRCSIRGSCGKDSFFGPELPCPDNGLAKEPDHDARKQLVELCGP
KWSTGPVCCEGNQIDALADQIKKANPIISSCPACKENFYNLFCTFTCSPDQSLFLNVTET
KKKGDKYIVTELDQLISDEYGSGFFDSCKDVKFGPTNSNAMEFIGGGAKDYSSFLAFLGH
KSLLGSPFQINFPKPSEYPEKGMDPLPMVPKKCNDEDENFRCSCVDCPAVCPALPEVSKS
GSCHVGLLPCLSFAAIFTYSILLLLVAVAVLGHIAWSKRTRLLEDDVAPSDDDDEGDMIH
IGATYDRPQRNYWINTVCDSAFSRLGYTAAKFPAITIVTSIVVVGILSLGWTKFEIEQNP
ARLWVSPSSAAAQEKAYFDSNFGPFYRAEQVFLVNDTNASGPGPVMSYDTLKWWLEAEDR
IRGLTGKQTGTTFNDICLKPTGDACVVQSVGGYLNDDISSVSPDTWEKTIRSCAESPVNC
RPAFGQPLDPKMIFGGWQESGNVIDATALIITWVVNNDDEGSSQVEHAMDWEASLRDELL
RLQAEASTRGLRLSFSTEISLEQELNKSTNTDAKIVVISYIIMFFYASLALGSTTISLQT
LMRNPASSLVQSKFSLGVVGILIVLMSISASIGLFSFLGVKVTLIIAEVIPFIVLAVGVD
NIFLIVHEFERVNTNHPDEMVEMRIAKALGRMGPSILLSASTETIAFALGAFVGMPAVRN
FAIYAAGAVFINAVLQITMFVSILSLNQRRVEDRRVDCIPCIQIKTAGVHLGNGSAYSRF
YEGSDEGVLQKFIRKTYAPTLLGPKVKTAVVVVFLGIFAAAVALIPEVALGLDQRVAIPD
GSYLIPYFNDLYDYFDSGPPVYFVTRELNVTERKHQQQLCSRFTTCETESLTNILESERK
RPEVSYIAATPASWIDDYFRWLDPSLDSCCVEGGSACFNNRDPAWNITLHGMPEGQEFIH
YLEKWIASPTNEDCPLGGQAAYGNALVIDAKRGTIPASHFRTSHTPLHSQEDFIAAYASA
RRIADGMSEKSGLKVFPYSVYYIFFDQYSSIISLTATLLCSALILILFISSILLGSLKTG
TVVTVTVIMIVTDIIGTMAVFNVSLNAVSLVNLIICVGIGVEFCAHIARAFMFPSRSVME
KARKFRNRDARAWTALVNVGGSVFSGITITKLVGVSVLAFTRSKIFEIYYFRIWLALVIF
AASHALMFLPVALSLVGGEGYMDNELDGGLEEDLADRRYRALLPDEESDDEY
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacagcattggttgctggcgaagcttatactctaaagcacgaagctggaagatgttcg
ataaggggtagttgtgggaaggatagcttctttggtcccgagcttccttgcccggataac
gggctcgcgaaggaaccggatcatgatgcgaggaaacaactagtcgagctatgcggtcca
aaatggagtacagggcctgtttgttgtgaggggaatcagatagatgctcttgcagatcag
atcaagaaggcgaatccgattatatcctcttgcccggcatgtaaagagaacttctacaac
ctcttctgtacctttacatgttcaccagatcaatctctattcttgaatgtgactgaaaca
aagaaaaagggtgataaatacatcgttactgagctagatcaactcatatctgatgaatat
gggtccggtttctttgatagctgcaaggatgttaagtttggaccaacgaattcaaatgct
atggaattcataggaggaggagccaaggattactcttcattcttggctttcctgggacat
aaatctttactgggttcgccattccagatcaactttccaaagccaagcgaatatccggag
aaaggaatggatccattacctatggtaccaaagaagtgtaatgatgaggatgagaacttc
cgatgttcctgtgtggattgccctgcagtctgtccagctttgccggaagtttccaagtca
ggctcatgtcatgttggattacttccttgcctttctttcgccgccatatttacttacagc
attttgttactgttggtcgccgtcgctgtccttggtcacatagcatggtctaaacgtact
cgacttctggaagacgatgttgcgccaagcgatgatgatgatgaaggggacatgatacac
atcggagccacgtatgaccgacctcaaaggaattactggatcaatacagtctgtgatagc
gcgttcagtcgtcttggctatacagctgcaaaatttccagctatcactattgtaactagc
atagttgtagtgggaatcttgagtttgggttggacaaaatttgagatcgagcaaaatcct
gcacgattgtgggtcagcccatcgtctgctgctgctcaagaaaaagcttatttcgattca
aattttggacccttttaccgtgccgagcaagtattcttggtcaatgatacaaatgcatca
ggtcctggtcctgtgatgagttacgatacattgaaatggtggcttgaagccgaagatcga
atcagaggattgaccggcaagcaaacaggtaccactttcaacgatatatgcttgaagccc
acaggtgatgcgtgtgttgttcaatctgtaggaggttacttgaacgacgatatctccagt
gtgagtccggatacatgggagaagaccatccgatcatgtgccgaatctcctgtcaattgc
cgccctgcttttggtcaaccattagatcccaaaatgatctttggtggctggcaagaatcc
ggcaatgtcatcgatgctactgccttgattattacctgggtagtaaacaacgatgatgag
ggatcatctcaagttgaacatgctatggattgggaagcttcccttcgagatgaattgtta
cgtttgcaggctgaggcaagcactcgtggtctgagactttcattctcgacagagataagt
ctcgaacaagaacttaataaatctaccaacactgatgcaaaaattgtcgtcatcagttat
attatcatgttcttttatgcatccttagcactaggctcaaccaccatctcattacaaaca
ttgatgcgcaacccagctagctctttggtccaatcaaaattttcactcggagtagtggga
atcctgattgtactaatgtctatctcagcatcaatcggtctattctctttcttaggtgtt
aaggttactcttatcatcgctgaggttattcctttcatagttcttgcagttggtgttgac
aatatcttcttaattgtgcacgaattcgaaagggttaatactaaccatcctgatgaaatg
gttgagatgcgtattgctaaagcactcggaagaatgggtccatcaattcttttgtcggcc
tctactgagactatcgcatttgcacttggtgcttttgttggtatgcccgcggttcgaaat
ttcgcaatctatgccgctggtgcagtattcataaatgctgttttgcagatcaccatgttc
gtctccattctcagtctcaatcaacgacgtgtcgaggatcgccgtgtagactgtatccct
tgcattcaaatcaagactgcgggtgttcatctagggaatggaagtgcttactctagattt
tatgaaggctctgatgaaggtgttcttcagaagttcattcgcaaaacctatgctccaact
ttacttggccccaaagtaaaaactgctgttgtggttgtatttcttggtatatttgctgct
gccgttgcgttgattcctgaagttgctttgggcttggatcaacgcgtggcaattccggac
ggctcatatctcattccatacttcaacgacttgtacgactactttgactcgggaccacca
gtgtacttcgtcactcgggagttgaatgtcactgaacgtaagcatcagcaacagctctgc
tctcgctttacaacatgcgaaacagagtccctcaccaatattttggagtccgaaagaaaa
aggccagaagtttcttatattgcggctactcctgctagttggatcgatgactatttccgt
tggctcgatccttcattagattcgtgctgcgttgaaggtggttcggcttgcttcaacaat
cgtgatccggcatggaatattactttacatggtatgccagaaggtcaagagtttatccat
tatttggagaaatggattgcttctccaaccaacgaggattgtcctcttggtggtcaagct
gcatatggaaatgctctagtcattgatgccaaacgaggtactatacctgcaagccacttt
cgcacaagtcacacaccacttcatagccaagaagatttcatcgctgcatatgcctctgca
cgcagaatcgcagatggtatgagtgaaaaatctggtctaaaagtattcccatacagtgtc
tactatattttcttcgaccaatacagctcaatcatcagtctaaccgctactctcctctgc
tccgctctcatccttatcctattcatctcctcgattcttctcggatccttaaaaaccggc
acagttgtaacagttaccgtcataatgatagtcaccgatatcattggcacaatggccgtc
ttcaacgtctctctcaacgcagttagtctcgtgaacctaattatatgcgttggtattggc
gtcgaattctgcgcccacatcgctcgcgcctttatgttcccttcccgctccgtcatggaa
aaagccagaaagttccgtaaccgtgatgctcgtgcttggactgctctagtcaacgtcggt
ggttcagtctttagcggtatcacgattacaaaattagtaggagttagcgtcttggccttt
acgaggagtaagatctttgagatttattactttagaatttggcttgcgctggttattttt
gccgcctctcatgctttgatgtttttacccgtggcgcttagtttggtcggtggagagggt
tatatggataatgagcttgatgggggtttggaggaggatttggcggataggagatatagg
gctttgttgccggatgaggagagtgatgatgagtattag
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integrated database retrieval system
