Sclerotinia sclerotiorum: SS1G_02408
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Entry
SS1G_02408 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SS1G_02408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_02408
Enzymes [BR:
ssl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SS1G_02408
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SS1G_02408
DNA repair and recombination proteins [BR:
ssl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SS1G_02408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
NFACT_N
Flu_M1
Motif
Other DBs
NCBI-GeneID:
5492488
NCBI-ProteinID:
XP_001596192
UniProt:
A7EAS6
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MPEIAEVARAVHHIRKNLVGKTLAIVKAQDDANVFGKVGTSAAEFQKALTGKKVDDYVLA
ATSGISLRHDGSKDEGEKEVWPPKFSKFSLQTAEEPKVDAAFTDSRRFSRIRLVDCVAGA
IRNTTPLKENGPDPVIDKDILTAEWLEQKLNKKQVPIKALLLDQANISGIGNWVGDEILY
RARLHPEQYSNTFSSEEIKRLHASMMYICQTAVDLLADSSKFPDDWMFKHRWGKGKKDGP
TALPNGEKITFLTVGGRTSCVVPSVQKKTGPVAGDIKKGNGSGDGMTSEDIPVKKQSSRK
RKAAMVSTNFEEFDEDATDPKKSKAKAQKSTQVKEKISGDGAGNIATKAVKLTKRKTSKS
TESKAMEGIAPVQPRRRSGRHVKTDGVQD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaatcgccgaagttgcgcgagccgtgcaccacatacgaaaaaacctcgttggt
aaaacgttggccatcgtgaaagctcaagatgacgccaatgtctttggcaaggtcgggaca
agtgctgccgaattccaaaaagcattgactgggaagaaagtagatgattatgtcctcgcc
gccacatccggtatttcacttcggcatgacggatcgaaagatgagggtgaaaaggaggtt
tggccaccaaagttctcaaagttttcactacaaactgcagaggaaccaaaggtcgatgct
gcattcacagattcgcggaggttttcgagaatcagactagtagattgtgttgctggagcc
attcgaaacacgacccctctcaaagaaaatggcccagatcctgtaatcgacaaagatatc
cttacagctgagtggctcgagcagaagctgaacaagaaacaagtgcctataaaggcattg
ttacttgaccaagcgaacattagcgggattgggaactgggtcggcgacgaaatattatac
cgcgcaagacttcatcctgagcaatatagcaatacattcagttctgaagagatcaagcga
ttgcatgcttcgatgatgtacatttgtcaaacagcggtagacttgttggcagactcgtcc
aagtttcccgatgattggatgtttaagcatcgatggggaaagggaaagaaagatggcccg
acagcgttaccaaatggggagaaaattacatttcttaccgttggtggacgaacgtcttgt
gtggtgccaagtgtacagaagaaaacggggcccgtcgccggcgatataaagaaaggaaat
ggatccggtgatggtatgacctccgaggatattccagtgaaaaaacaaagctcgaggaag
aggaaggccgctatggtatccacgaacttcgaagagtttgatgaagatgccacagaccca
aaaaagtcaaaagcaaaggctcagaaatccacccaagtgaaagaaaagatttcgggtgat
ggtgcggggaatatcgccacgaaggcagtcaagctgactaagaggaagacgtcaaaatct
accgaatcaaaggcgatggagggcattgcaccagttcaaccaaggcgtagatctggtcgt
catgtgaagactgatggcgtccaggattga
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