Sclerotinia sclerotiorum: SS1G_03089
Help
Entry
SS1G_03089 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SS1G_03089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssl03009
]
SS1G_03089
Ribosome biogenesis [BR:
ssl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SS1G_03089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Utp13
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Beta-prop_DCAF12
WD_LRWD1
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
5492686
NCBI-ProteinID:
XP_001596866
UniProt:
A7ECQ0
A0A1D9Q2K7
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MATKAPYKTTFEPEHTIQPIYTGGSVALDQTGRILATTLGEDALLTDLDTGRELARIEGD
GEVISTLSLTPSASHLVICSRSLSMRIYSLRPSLASDLTLTYELLRTLKPHATPVVVLAV
DQTSTLLATGAADGVVKVWDIAGGYVTHTFRGPNVLISALHFFELVASGKDEELGISARN
RKKERLKSQADDESNENETARGFRLASGSQDGKVRIWDLYKRNCASVLDSHVSDVRALDY
SPEENALLTGSRDKTIMWWDAKTWKIRKVIPVLEEVEAAGFINAGKFTYTGGSNGNIRLW
QTENGREVTQPQESGAEADAIVDALSFPSIPFILSIQADHTLTLHSTTPVENADSTVTIS
ALPQIRRISGTHDEIIDLGFLLPNQSLLALATNSEELRIVSLNQGSPTDSTESTKYFGAD
VAQLKGHEDIIICLDIDWSGHWIATGAKDNTARLWRIDPENSSYTCHTTFTGHAESLGAI
ALPHMPPPESSAAYKSPLDHPPSFLLTGSQDQTIKRWDIQAQVVAGKAPRASYTRKAHDK
DINALDINHSSQLFASASQDRTVKIWSADELEVQGVLRGHRRGVWSVKFAPKDTPTLVGD
SGPASGKGLILTGSGDKTVKIWNLSDYSCLRTFEGHTNSVLKVAWLRLPAPEDRNRKHVQ
IATAGGDGLVKVWSAANGESECTLDNHEDRVWALTVHPKTNMIVSGSGDSTVTFWKDTTS
ATIAAREAANTQFVEQEQELQNFIHAGSYREAIVLALALNHPARLLSLFTTVVTGAQEEG
SISGLKAVDSVLASLSDAQIFSLLLRIRDWNTNARTASVAQRILSVLVKSYPASRLSDLK
VKGAQGPRSLKEVLDALRVYSERHYKRMEELVDESYLIEYTLREMDGLGFIENDGAGDGA
LDIGGDTIMV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggctactaaagccccttacaaaacgacttttgaacccgagcacactatacaaccaatt
tatactggagggagtgttgcgcttgatcaaacggggcgcatacttgctacaacccttggg
gaggatgcattattgacggatttagatacagggagggaattagcccggatagaaggagat
ggagaggtcatctcgacgttaagtcttaccccatctgcttctcatctcgtcatatgttcg
agatcgctgtccatgcgaatttactccctacgaccatcacttgcttctgaccttactctc
acctacgaacttcttcgaactcttaagccgcatgctacaccagtggtagttctagctgtg
gaccagacgagcacactactggcaactggagcagcagatggagtggtgaaagtttgggat
attgccggcggttacgtcacacatacatttcgaggtcctaatgtactcatctccgcccta
cattttttcgaattggtcgcgagtggtaaggacgaagaattaggcatttcagcacgaaat
cgaaagaaggaacgtctgaagagtcaagcggatgatgaaagcaatgagaacgagaccgcg
agaggattccgtctcgcgtctggtagtcaagatggaaaagtccgtatttgggatctttac
aagagaaattgtgcttcagttttagattcacatgtatccgatgttcgagctttagactat
tcgccagaagaaaatgcgctgcttactggaagtcgagataagacaataatgtggtgggat
gcgaagacgtggaagattcgaaaagttatacccgtgcttgaagaagtggaagccgcaggg
tttatcaatgctggaaagttcacatatacaggagggtcgaatggaaacatcaggctttgg
caaacggaaaatggcagagaagtcacacaaccgcaggagagtggtgcggaggcagatgct
attgtagacgcgctctcgttccccagtattcctttcattttatcaattcaagcagatcat
actttaacccttcactcaaccactcccgtggaaaacgctgattcaaccgtcaccatctcg
gccctacctcaaatccgacgaatttcgggtactcatgacgagatcattgatttaggattt
cttttacccaatcaatcccttcttgctttagctaccaattctgaggaactgcggattgtt
tcgctaaatcagggttctccaactgactctacagagtctacaaaatattttggtgccgac
gtcgcccaactaaagggacatgaagatattatcatctgtttagatattgactggtcgggt
cattggattgccactggcgctaaagataatactgctcgactttggcgaattgatcccgaa
aactcctcatatacctgccacacaacttttactggacatgcagaatcccttggtgctatt
gcacttcctcatatgccaccaccagaatcttccgccgcctacaagtctcctttggatcat
cctcccagctttttgttgaccggttcccaggaccaaactattaagcgctgggatattcaa
gctcaggtggtggctggaaaagcaccaagagcttcatacacacgcaaagctcacgacaaa
gacatcaatgcattggacatcaaccacagctctcaattatttgcatctgcatctcaagat
cgaaccgtcaaaatttggtctgccgatgaattagaggttcaaggtgtattacgtggtcac
cgtcgtggtgtttggtctgtaaagttcgcgccgaaagataccccaactcttgtaggagat
tccggcccggcttcaggaaaaggattgatcctcaccggaagtggagataagacagttaag
atatggaacctttcagactacagctgtctacgaacatttgaagggcataccaactctgta
ctcaaagtggcatggctgagattacctgcccctgaagatagaaacagaaaacacgtacaa
atagccacagcaggtggtgacgggctcgtcaaggtctggagtgcggcaaatggagaatcc
gaatgcacgttagacaaccacgaagatcgagtctgggctctcactgtccatcctaaaacc
aacatgatagtatcaggaagtggggactcaacggtcacattctggaaggatacgacatcg
gcaaccatagccgcaagagaggcagccaatacccaatttgtcgagcaggagcaagaattg
caaaatttcatacatgctggaagctatagagaagctatcgttctcgcacttgcacttaat
catcctgcacggttactctcccttttcacaactgttgtcactggcgctcaagaagaagga
agtatatcaggtctcaaagccgttgattctgtccttgcctcattatcagatgctcaaatc
ttcagccttcttctcagaatacgagactggaatactaacgccaggactgcatctgttgca
caaagaatattatccgttctcgtgaaaagttaccccgcttcgagattatcggatctaaaa
gttaaaggagctcaagggccgagaagtttaaaggaagtgctagatgctttgagggtatat
tcggaaagacattacaagagaatggaagaattggttgatgagagttaccttatagaatat
actttacgggaaatggatggtttagggtttattgaaaatgatggagctggagatggagcg
ttggatattggtggagatactattatggtgtaa
DBGET
integrated database retrieval system