KEGG   Sclerotinia sclerotiorum: SS1G_03089
Entry
SS1G_03089        CDS       T01071                                 
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
ssl  Sclerotinia sclerotiorum
Pathway
ssl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ssl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SS1G_03089
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssl03009]
    SS1G_03089
Ribosome biogenesis [BR:ssl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SS1G_03089
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Utp13 WD40_WDHD1_1st EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_IP5PC_F Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_DCAF12 WD_LRWD1 KNTC1_N
Other DBs
NCBI-GeneID: 5492686
NCBI-ProteinID: XP_001596866
UniProt: A7ECQ0 A0A1D9Q2K7
LinkDB
Position
Unknown
AA seq 910 aa
MATKAPYKTTFEPEHTIQPIYTGGSVALDQTGRILATTLGEDALLTDLDTGRELARIEGD
GEVISTLSLTPSASHLVICSRSLSMRIYSLRPSLASDLTLTYELLRTLKPHATPVVVLAV
DQTSTLLATGAADGVVKVWDIAGGYVTHTFRGPNVLISALHFFELVASGKDEELGISARN
RKKERLKSQADDESNENETARGFRLASGSQDGKVRIWDLYKRNCASVLDSHVSDVRALDY
SPEENALLTGSRDKTIMWWDAKTWKIRKVIPVLEEVEAAGFINAGKFTYTGGSNGNIRLW
QTENGREVTQPQESGAEADAIVDALSFPSIPFILSIQADHTLTLHSTTPVENADSTVTIS
ALPQIRRISGTHDEIIDLGFLLPNQSLLALATNSEELRIVSLNQGSPTDSTESTKYFGAD
VAQLKGHEDIIICLDIDWSGHWIATGAKDNTARLWRIDPENSSYTCHTTFTGHAESLGAI
ALPHMPPPESSAAYKSPLDHPPSFLLTGSQDQTIKRWDIQAQVVAGKAPRASYTRKAHDK
DINALDINHSSQLFASASQDRTVKIWSADELEVQGVLRGHRRGVWSVKFAPKDTPTLVGD
SGPASGKGLILTGSGDKTVKIWNLSDYSCLRTFEGHTNSVLKVAWLRLPAPEDRNRKHVQ
IATAGGDGLVKVWSAANGESECTLDNHEDRVWALTVHPKTNMIVSGSGDSTVTFWKDTTS
ATIAAREAANTQFVEQEQELQNFIHAGSYREAIVLALALNHPARLLSLFTTVVTGAQEEG
SISGLKAVDSVLASLSDAQIFSLLLRIRDWNTNARTASVAQRILSVLVKSYPASRLSDLK
VKGAQGPRSLKEVLDALRVYSERHYKRMEELVDESYLIEYTLREMDGLGFIENDGAGDGA
LDIGGDTIMV
NT seq 2733 nt   +upstreamnt  +downstreamnt
atggctactaaagccccttacaaaacgacttttgaacccgagcacactatacaaccaatt
tatactggagggagtgttgcgcttgatcaaacggggcgcatacttgctacaacccttggg
gaggatgcattattgacggatttagatacagggagggaattagcccggatagaaggagat
ggagaggtcatctcgacgttaagtcttaccccatctgcttctcatctcgtcatatgttcg
agatcgctgtccatgcgaatttactccctacgaccatcacttgcttctgaccttactctc
acctacgaacttcttcgaactcttaagccgcatgctacaccagtggtagttctagctgtg
gaccagacgagcacactactggcaactggagcagcagatggagtggtgaaagtttgggat
attgccggcggttacgtcacacatacatttcgaggtcctaatgtactcatctccgcccta
cattttttcgaattggtcgcgagtggtaaggacgaagaattaggcatttcagcacgaaat
cgaaagaaggaacgtctgaagagtcaagcggatgatgaaagcaatgagaacgagaccgcg
agaggattccgtctcgcgtctggtagtcaagatggaaaagtccgtatttgggatctttac
aagagaaattgtgcttcagttttagattcacatgtatccgatgttcgagctttagactat
tcgccagaagaaaatgcgctgcttactggaagtcgagataagacaataatgtggtgggat
gcgaagacgtggaagattcgaaaagttatacccgtgcttgaagaagtggaagccgcaggg
tttatcaatgctggaaagttcacatatacaggagggtcgaatggaaacatcaggctttgg
caaacggaaaatggcagagaagtcacacaaccgcaggagagtggtgcggaggcagatgct
attgtagacgcgctctcgttccccagtattcctttcattttatcaattcaagcagatcat
actttaacccttcactcaaccactcccgtggaaaacgctgattcaaccgtcaccatctcg
gccctacctcaaatccgacgaatttcgggtactcatgacgagatcattgatttaggattt
cttttacccaatcaatcccttcttgctttagctaccaattctgaggaactgcggattgtt
tcgctaaatcagggttctccaactgactctacagagtctacaaaatattttggtgccgac
gtcgcccaactaaagggacatgaagatattatcatctgtttagatattgactggtcgggt
cattggattgccactggcgctaaagataatactgctcgactttggcgaattgatcccgaa
aactcctcatatacctgccacacaacttttactggacatgcagaatcccttggtgctatt
gcacttcctcatatgccaccaccagaatcttccgccgcctacaagtctcctttggatcat
cctcccagctttttgttgaccggttcccaggaccaaactattaagcgctgggatattcaa
gctcaggtggtggctggaaaagcaccaagagcttcatacacacgcaaagctcacgacaaa
gacatcaatgcattggacatcaaccacagctctcaattatttgcatctgcatctcaagat
cgaaccgtcaaaatttggtctgccgatgaattagaggttcaaggtgtattacgtggtcac
cgtcgtggtgtttggtctgtaaagttcgcgccgaaagataccccaactcttgtaggagat
tccggcccggcttcaggaaaaggattgatcctcaccggaagtggagataagacagttaag
atatggaacctttcagactacagctgtctacgaacatttgaagggcataccaactctgta
ctcaaagtggcatggctgagattacctgcccctgaagatagaaacagaaaacacgtacaa
atagccacagcaggtggtgacgggctcgtcaaggtctggagtgcggcaaatggagaatcc
gaatgcacgttagacaaccacgaagatcgagtctgggctctcactgtccatcctaaaacc
aacatgatagtatcaggaagtggggactcaacggtcacattctggaaggatacgacatcg
gcaaccatagccgcaagagaggcagccaatacccaatttgtcgagcaggagcaagaattg
caaaatttcatacatgctggaagctatagagaagctatcgttctcgcacttgcacttaat
catcctgcacggttactctcccttttcacaactgttgtcactggcgctcaagaagaagga
agtatatcaggtctcaaagccgttgattctgtccttgcctcattatcagatgctcaaatc
ttcagccttcttctcagaatacgagactggaatactaacgccaggactgcatctgttgca
caaagaatattatccgttctcgtgaaaagttaccccgcttcgagattatcggatctaaaa
gttaaaggagctcaagggccgagaagtttaaaggaagtgctagatgctttgagggtatat
tcggaaagacattacaagagaatggaagaattggttgatgagagttaccttatagaatat
actttacgggaaatggatggtttagggtttattgaaaatgatggagctggagatggagcg
ttggatattggtggagatactattatggtgtaa

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