Sclerotinia sclerotiorum: SS1G_03207
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Entry
SS1G_03207 CDS
T01071
Name
(RefSeq) conserved hypothetical protein
KO
K12856
pre-mRNA-processing factor 8
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_03207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssl03041
]
SS1G_03207
Spliceosome [BR:
ssl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
SS1G_03207
Complex C
U5 SnRNP specific factors
SS1G_03207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP8_domainIV
JAB
PROCT
OCD_Mu_crystall
Motif
Other DBs
NCBI-GeneID:
5491634
NCBI-ProteinID:
XP_001595119
UniProt:
A7ED18
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MNNKLTFGLNLDYQQSQCELEQLGIETVQKETIHPRKSYKMNSSCADILLFASHKWNVTR
PSILFDTKDVIEATTTNKFWVDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSIYPSATGL
MIGIDLAYNLYSAYGQYFPGLKQLIQQAMAKIMKANPALYVLRERIRKGLQLFSFSLMTQ
MFYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAE
EVAALIRSLPIEEQPKQLIVTRKGLLDPLEVHLLDFPNISIRASELQLPFQAAMKVEKLG
DMILRATEPQMVLFNLYDEWLKSISSYTAFSRLILILRALHVNQDKTKLLLRPDKTVITQ
EHHIWPTLSDEDWIKVETQLRDLILNDYGKKNNVNTSSLTSSEVRDIILGMEISAPSMQR
QQAAEIEKQQQEQQQLTAVTTKTQNVHGEDIIVTTTSQFEQQTFASKTEWRTRAIATSNL
RTRSNNIYISSDDVKEDDHYTYIMPKNILKRFITIADLRVQVAGYLYGSSPPDNDQVKEI
RCIVMVPQIGSTRDVQLPQQLPQHEYLDQMEPLGIIHTVSGNEPPYMTAMDVTQHARLMN
AHKSWDKKTVSMTVSFTPGSVSLASWALTPHGYKWGCRK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaagctgacgtttggtttaaatctagactatcaacagagccaatgtgaactt
gaacaacttggtattgagacagtacagaaggagactattcatcctagaaagtcctacaag
atgaacagctcctgtgccgatattctactgtttgcaagccacaagtggaatgtaactcgc
ccatctattctattcgacacaaaagatgtaattgaagctactacaacgaacaaattctgg
gtagatgtccaacttcgttacggagactatgattctcatgacattgaacgatatgtccga
gcaaaatacctcgattacacaactgacagtatgagtatctatccttccgccacaggtctg
atgattggtattgatcttgcctacaatctctactcggcgtatgggcaatacttccccggt
ctcaagcaattgattcagcaggctatggccaaaatcatgaaggcaaacccagccctgtac
gtcttgcgtgaacgtatcaggaagggtctccaattattcagcttttcattgatgacacaa
atgttttatcgtgttaccatccacaagactttcgagggtaacttgacgaccaaaccgatt
aacggagcaatttttatcttcaatcctcgcactggtcaactcttcttgaagattattcat
acaagtgtttgggcaggacagaaacgtctaggacaattggctaagtggaagactgctgaa
gaagttgctgctctcattagatcattgcccatcgaagagcaaccgaaacagcttattgtt
accagaaagggtcttcttgatccacttgaagtgcatttgcttgactttccgaacatctca
attcgtgcttccgaattgcaattaccattccaggctgccatgaaagtcgaaaagctcggt
gacatgattcttcgtgccactgaacctcaaatggttctcttcaatctttatgacgaatgg
ctcaaatcaatttcctcatacaccgccttctcacgtttgatccttatcttacgtgcttta
catgtaaatcaggacaagacgaagttattacttcgacctgataagactgtgatcactcaa
gagcatcatatttggcccacattatcagacgaggattggatcaaggtcgagactcaactg
cgtgatctcatccttaatgattacggcaaaaagaacaatgtcaacacttccagtcttacc
agcagtgaagttcgtgacatcatcttgggtatggaaattagtgctccatcaatgcaacgt
caacaggcggccgagattgaaaagcagcaacaagagcagcaacagcttacagctgtcaca
accaagactcaaaacgttcacggagaggatatcattgttacaactacctcgcagttcgag
caacaaacctttgcatcgaaaactgaatggagaacgagagcgattgcaacctcgaacttg
aggacgagatctaacaatatctatatctcctctgacgatgttaaagaggatgatcattac
acgtatatcatgcccaaaaatatcttgaagcgctttattacgatcgcggatttgagagtt
caagtagctggatatctatatggttcatcccctccggacaacgaccaagtgaaggagatt
cgttgtattgtaatggtaccacaaattggtagtacacgcgacgtacaattgcctcagcag
ttaccacagcacgaatatcttgaccaaatggaacctctcggaattattcatactgtttct
ggtaacgaaccgccgtacatgacagctatggatgttactcaacatgcacgtctcatgaac
gcgcacaagtcatgggataaaaagacagtcagcatgacggtttcattcaccccaggaagt
gtgtcactagcatcgtgggcgctcacgcctcatggttacaaatgggggtgcagaaaataa
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