Sclerotinia sclerotiorum: SS1G_03226
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Entry
SS1G_03226 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03420
Nucleotide excision repair
ssl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SS1G_03226
09124 Replication and repair
03420 Nucleotide excision repair
SS1G_03226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssl04121
]
SS1G_03226
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_03226
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssl04147
]
SS1G_03226
Ubiquitin system [BR:
ssl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
SS1G_03226
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
SS1G_03226
TCR (transcription coupled repair) factors
Cul4-CSA complex
SS1G_03226
Exosome [BR:
ssl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SS1G_03226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
5491654
NCBI-ProteinID:
XP_001595138
UniProt:
A7ED37
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MNKTMGVSRPAIIDLTRPSNFQPHTGAKRLVIKNLRVTSPSDKEEYFRKTWNELDDALDS
VFNNKQPVSPLEVLCRGVESICRRGKEKADELYRHLENRCHTHIKDNLLPAISRNGDSST
VETLRTVERVWGIWRTQLVLLRSIFSYLDRAYLLNSKTLPQLEDMGIRQFREVVFLKGRD
VSKTGTQVILGICELVHYDRESLDLFDSVLLRASIATIHILGVYTSLFEKQFQKISSAYL
EQFASERSSSPLKDYISSCDNLLQRESLRCDTYNFDSTTKKTLLDTAHDILIKKRADVLL
ETVAVSKLLEDEVMASLKSLYQLLRLSGIQDQLKAPFANHVKVFGSSIAMDKERGDEMVV
RLLELKRSLDVIIRDAFNKDSVFTFCLRDSFGQFINDRQVAKAWGTDTSKVGEMIAKYMD
TLLRGGLKAVPRSLVSDATDRNEAEKKGQASTGDEDAELDRQLEQGLELFRFIEGKDVFE
AFYKRDLARRLLMARSASQDAERNMLAKLRGECGNSFTHNLESMFKDQEISRDEMISYKQ
SLSNTSKTTLDLQVSVLSSAAWPTYPDIEVNLPAEVAKHIEKYDRHYKHKHSGRRLTWKH
SLAHSIVRATFNKGVKELLVSGFQAVVLVLFNELEDGGHLSYTDISKATGLVDGELKRTL
QSLACAKVRPLTKYPKGKEISETDTFTINLNFSDPKFRIKINQIQLKETKEENKETHEKV
IQDRSFETQAAIVRIMKSRKTMTHQNLVAEVINQTKGRGAVEPAEIKKHIEKLIEKDYIE
REDGGIYTYLA
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacgatgggggtttcgcgccccgctataatagatttaacaagaccatcgaat
tttcaaccacatactggagcgaagagattagtgattaagaacctaagggtaacttctccg
agcgataaggaggagtatttcaggaagacttggaacgagctagatgatgctttggattcg
gtttttaataataaacagccagtatcaccattggaagtcctgtgtcgtggagtcgaatca
atttgtcggcgtggaaaggaaaaggcagatgagctatacaggcatctagaaaaccgttgc
cacacacatatcaaggataatcttttgccagctatttcacgcaatggagattctagcacg
gtggaaactctgcggacagtggagagagtatggggaatttggagaactcaattggttctg
ttaagatccatattcagctatcttgatagggcatatctgctaaactcgaaaacacttccg
cagcttgaagatatgggcatacggcaattccgcgaagtggtatttttgaagggaagggat
gttagcaagacaggaacacaggtcatattgggaatatgcgagcttgtgcattatgataga
gagagcttggatttattcgactcagtccttctccgagcttccattgctacaattcacatt
cttggtgtatacacaagtctcttcgagaaacagttccagaagatttcttcagcctacctc
gaacaatttgcatcagaacggagctcctcgccactaaaagactatatatcttcctgcgat
aatctgttacaacgagaaagtctccgttgtgatacatataatttcgacagtactaccaag
aagactttgcttgataccgcgcacgacattttgatcaaaaagcgtgctgatgttctgttg
gagacggtagctgtttcgaagcttcttgaagatgaagtaatggcatcgcttaaatctttg
tatcagcttttgagactttcgggaattcaggatcagctaaaggcacctttcgccaatcac
gttaaagttttcgggtcatctattgcaatggacaaggaaaggggtgatgaaatggttgtc
cgtttactcgagctgaaacggtcactggacgtcatcatccgcgatgccttcaacaaagat
tcagtgtttactttctgccttcgggactcatttggacaatttataaatgaccgccaagtc
gctaaggcatggggtacagatacttccaaagttggagaaatgatagcgaaatatatggat
actttgttgcgtggagggctcaaagctgtacctcgttctcttgtatccgacgccacagat
cggaatgaggctgagaagaaaggacaagccagtaccggcgacgaggacgcagaattagac
cgtcaactggaacaaggccttgagctgtttcgcttcatcgaaggtaaagatgtttttgaa
gcgttttataaaagagatttggcacgccggttgttgatggcacgcagtgcaagccaagat
gcggagaggaatatgcttgctaagttaaggggcgaatgtggtaacagtttcactcataac
cttgagtcgatgttcaaggatcaagaaatttctcgagatgaaatgatatcatataagcag
tcactcagcaacacaagcaaaaccacactggatctccaagtcagtgtcctctcatctgct
gcttggccaacgtatccggatattgaagtcaacctccctgcggaagtcgcaaaacatatt
gaaaagtatgaccggcattataagcacaaacacagtgggcgtcgattgacttggaaacat
tctcttgcacacagcatcgtcagggcaacgttcaacaagggtgtaaaggaactcctagtt
agtggttttcaagctgttgtgctcgttctctttaatgagctcgaggatggtggccatctt
tcctacacggatatttccaaagcaacgggtcttgtcgatggtgaattgaaacgaaccctg
caatcacttgcatgtgccaaagtccgacccttaactaagtaccctaaaggcaaagaaatc
agtgagactgatacgtttaccatcaacctcaatttctcagatccaaaatttaggatcaag
attaaccaaattcaattgaaagagaccaaggaggagaataaagaaacgcacgaaaaggtt
attcaggatagaagctttgaaactcaggctgctattgttagaatcatgaagtcaagaaag
acgatgacgcatcagaatttggtagcggaggtcataaatcaaaccaaagggagaggtgca
gtagaaccggcggaaatcaagaaacatattgagaaattaatcgaaaaggactatatcgag
cgcgaagatggcggaatttatacatatctagcatag
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