Sclerotinia sclerotiorum: SS1G_03339
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Entry
SS1G_03339 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_03339
03041 Spliceosome [BR:
ssl03041
]
SS1G_03339
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
SS1G_03339
Spliceosome [BR:
ssl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
SS1G_03339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
Cas_Cas2CT1978
RRM_PARP14_3
RRM_8
Motif
Other DBs
NCBI-GeneID:
5491739
NCBI-ProteinID:
XP_001595250
UniProt:
A7EDE9
A0A1D9Q7V3
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MADNGPPSSAQLPPPPQTSAGAPGYENGHNSQGNPSHMPPPPLPPVIIPQNTNPIPTAIT
SPMGENGGVMSPDSAGGFVRRAAPEPNKRALYVGGLDPRVTEEVLRQIFETTGHVQNVKI
IPDKNSKGFNYGFVEYDDPGAAERAMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFH
IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSM
DGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSYDMIVQQT
PQWQTTCYVGNLTPYTTQQDLVPLFQNFGYVVETRFQADRGFAFVKMDSHENAALAICQL
SGYNVNGRPLKCSWGKDKAPTSAGFDGSQQSYSPQAGPTPGGFPGTPNAYFPQYGGMPPQ
AGPQSAGPMASQQSPGQFAGQQGGYGGPPAQSAAQYGNQPMGYGGPASAGGYGRGAQPTP
AAQWSAPTAQSYGNGFGGYQG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacggtccaccaagcagcgcccagctcccaccaccaccgcagacttctgct
ggtgcgccaggctatgaaaatggtcacaatagccagggcaacccctcgcatatgccaccg
ccaccacttcctccagtgattatcccgcagaacacgaatccaatcccaactgccattacc
tctcctatgggtgaaaatggtggggtaatgtcgccagatagcgctggtggattcgttcgc
cgagctgcaccggaaccaaacaagcgcgcattatatgttggaggtcttgacccaagagtc
actgaagaggtgctccgtcagatttttgagaccactggacatgttcaaaatgttaaaatc
attcctgacaagaattcaaagggatttaattatggttttgtcgaatatgatgatcctgga
gcagctgagagagctatgcagaccttgaatggaagacgtgttcatcaggccgaaattcga
gtgaactgggcctaccagtcgaacacttcaaacaaggaagatacatcgaaccactttcac
atctttgttggagacctctcaaacgaggtgaacgacgaagttctactacaggcgttctct
gcctttggttccgtttccgaggcacgtgttatgtgggatatgaagacaggaaggtccaga
ggctacggctttgctgctttccgtgaacgtcaggatgccgagaaggcattaagctctatg
gacggtgagtggctgggctcccgagctattcgttgtaactgggcaaaccaaaagggccag
ccttctatctcgcagcaacaagctatgtctgccatgggcatgactcctaccactcctttt
ggtcatcaccactttccaacccatggtgttcagagttacgatatgattgttcagcaaact
cctcaatggcaaaccacttgctacgtcggaaacttgacaccatacacaacacaacaagac
cttgttcccttgttccagaattttggatatgttgtggaaactcgttttcaggctgatcgt
ggctttgcatttgtaaagatggattctcatgaaaatgctgcacttgccatttgccagttg
agtggatacaatgtcaacggccgtcctctcaagtgtagttggggcaaagacaaagcacct
acttcggcaggattcgacggctctcagcagagctacagccctcaggccggaccaactccg
ggtgggttcccaggtacacccaacgcttatttcccacaatatggtggaatgcctccgcaa
gctggaccgcaatcagctggacccatggctagccaacagtctccaggccagttcgctggt
caacaagggggatatggtggtcctccggctcaatccgccgcgcaatatggcaatcaaccc
atgggttatggtggccctgccagtgctggaggatatggtcgaggtgcgcaaccaacccca
gccgcgcaatggagtgctcccactgcacaaagttacggtaacggctttggtggatatcag
ggctaa
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