Sclerotinia sclerotiorum: SS1G_03468
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Entry
SS1G_03468 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_03468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssl03041
]
SS1G_03468
Spliceosome [BR:
ssl03041
]
Complex B
Other components
Prp19-related factors
SS1G_03468
Complex C
SS1G_03468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
RRM_occluded
RRM_YTH1
DUF5529
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
5491682
NCBI-ProteinID:
XP_001595379
UniProt:
A0A1D9Q7J4
A7EDS8
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MPPQIKQDLNRSGWETTDFPSVCENCLPDNPFVQMIKQDHGEECKICTRPFTVFQWKADR
TARSKRTNICLTCARLKNCCQCCMLDLSFGLPIVVRDAALKMIAPGPQSEVNREYYAQNH
EKEIEEGKGMEEYEKTDEKARELLRRLANSQPYFRKGRKMITDGEGGGSGAAGGSESEKG
MALATKGPGPIRTRDGQPSRGTGRGGRGGMRGGRAFPSAAQLPPGPQDILPPSDRSITSL
FITGVEDDLPEYKIRDFFSPYGKLRSLVCSHMSHCAFINYATREGAEAAAEALQGKAIIA
GCPLRVQWGKPRPIGTMDKDERIATGREGRSAFSSSGSGAQRRAIEGGASQAAAPRDDLA
SMSAVAAPPGAGDVQYASLAGN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgccaccacaaatcaaacaagatctcaatcgctctggatgggaaaccaccgacttccct
tctgtctgtgaaaactgtcttcccgataaccccttcgtacaaatgattaaacaagaccac
ggcgaagaatgcaaaatctgcacaagacccttcacagtcttccaatggaaagccgatcgc
acagcccgcagcaagcgtaccaatatctgtctaacatgcgcgcgattgaagaattgctgt
caatgctgtatgttagatttgagtttcggattaccgattgtagttcgagacgcggcgctg
aagatgattgcgccgggcccgcaaagtgaggtcaacagggaatattatgcgcagaatcat
gagaaggagattgaggaagggaagggtatggaagagtatgaaaaaaccgatgagaaggct
agagaactcttgaggaggttggcgaatagtcagccttattttagaaaggggagaaagatg
attacggatggggaaggtggtgggagcggtgctgccggcggaagtgaaagtgagaagggt
atggctttggcgactaagggaccgggaccgatacgaacacgagatggacagccgagcagg
ggtactggccggggaggtagaggcgggatgagagggggaagagccttccctagtgcagca
caattacctcctggtcctcaagatatcctaccaccttccgatagatcgataacttcgcta
ttcattactggtgtagaggacgacttgccagaatacaaaatcagggatttcttctcaccg
tacgggaaattaagatcactggtctgttcgcacatgtcacactgcgcgttcattaattac
gcgacaagagaaggtgccgaagctgcagcagaagcattacaagggaaagctataattgca
ggctgtccactgagagtacagtggggcaagccgagaccaattggtaccatggataaggat
gagcgcatagccacaggcagggaaggacgatcagcgttttcgagttcgggttcgggtgca
cagagaagagcgattgagggtggtgcttcacaagctgcagctcctcgggatgatttggcc
agtatgtctgctgttgctgctccacccggtgcaggcgatgtgcaatatgctagtctggct
ggcaattaa
DBGET
integrated database retrieval system
