Sclerotinia sclerotiorum: SS1G_03474
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Entry
SS1G_03474 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_03474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_03474
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SS1G_03474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_57_C
Nucleoporin_FG
WIYLD
Adhesin_P1_N
Motif
Other DBs
NCBI-GeneID:
5491688
NCBI-ProteinID:
XP_001595385
UniProt:
A7EDT4
A0A1D9Q7E1
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MFGSTFGQSQPAGGGLFGSTGTAQPAGGLFGSTTTTGTQNQGGGLFSGLGQNTQQNQPQQ
TGGLFAGGLGASTQQNQPQAGSLFAPNAQQPQQQPGGLFSGQTMGAQQQAAQQQQNTILG
GSQQQTSLFGQTQPSQALGQSQGQFNNTLFGASGLRPREKSVIDQIETVVGKWDTGNKDC
AFQYFFYNNVGEDRAPFYQPQPNEDPRAWEEALSKKPGPGYIPVACIGFQMMGERIKAQQ
QHLAAFNIRLHDINASLTNLLQTHDTRTSIRAMDARRKHVVLKQRCLALATKVQVLRNRG
YALSGDEEDLKAKLIKIEKGVTDPALGARAEEIWARMINVQERGRLLRTELERVGQENGE
ILDDTMTARCKKILEDYQTQLAHLKKELDRVHKDYIEWEKEQPPQTAARSTFGR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaagtactttcggccaaagccagccagctggcggaggtttatttggctcaaca
ggcacggcgcaaccagcaggagggttatttggctcgactacaactacgggaactcagaac
caaggaggagggctttttagcgggttagggcaaaacactcaacaaaatcaaccacagcag
accggcgggctctttgctggaggacttggagcaagcactcagcagaatcagcctcaagca
ggaagcttatttgcaccgaatgcccaacagccacagcagcaacctggaggactgttctca
ggacagactatgggagcacagcagcaagcagcccagcaacagcaaaacaccattcttgga
ggatcacaacaacagactagtttattcgggcaaacacaaccgtcgcaagctttggggcaa
tcacaaggacaatttaacaacaccctatttggagccagcggactgagacctcgagaaaag
agtgtcatagaccagattgaaacagtcgtgggtaaatgggatactggaaataaggattgt
gccttccaatatttcttttacaacaacgtcggcgaggacagggcgccattctaccaaccg
cagcctaatgaggatccgagagcttgggaagaagccctttcgaaaaagccaggacctggg
tatatcccagtagcatgtattggttttcaaatgatgggcgagagaatcaaggctcagcaa
cagcatcttgcagcgttcaacattcgtctacacgacataaatgctagcttgacgaaccta
ctacaaactcacgatacgaggacgagtatacgggcaatggatgctaggaggaagcatgtg
gtattaaaacaaaggtgtctggcgttggcgactaaagtacaggttctaagaaacagaggc
tatgcgctcagtggagacgaggaggacctcaaagctaagcttatcaagatagagaagggg
gttactgatcccgcgttaggtgccagagcagaagagatttgggcgcgaatgatcaacgtt
caagaaagaggccggctattaaggaccgaactggagagggttgggcaagaaaatggagag
attttggacgataccatgaccgcgcgatgcaagaagatcctggaagactatcaaactcaa
ttagcacatttgaaaaaggagttggatagagtacataaagattatatcgaatgggaaaag
gagcagccgccacagacagcagcgaggtcaacatttggccgatga
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