Sclerotinia sclerotiorum: SS1G_03817
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Entry
SS1G_03817 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14300
nuclear pore complex protein Nup133
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_03817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_03817
03036 Chromosome and associated proteins [BR:
ssl03036
]
SS1G_03817
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SS1G_03817
Chromosome and associated proteins [BR:
ssl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SS1G_03817
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
CCDC146_C
DUF2368
Motif
Other DBs
NCBI-GeneID:
5491855
NCBI-ProteinID:
XP_001595728
UniProt:
A7EES7
LinkDB
All DBs
Position
Unknown
AA seq
1351 aa
AA seq
DB search
MFSPAVNAGAPAPVRSSRRRPRPSSNENSLAQPKSKRVRSSYDDQTFAPNGTLEMDEAKS
NKVATLVRRESPKEVPNPRREIAVRGKKSKGAERPGKGDGSVVLTKNDTYTVSKLPALPD
QIRTDITARLHGAIYSDSGYALALTHSHAFVWPYAINIPSPETFTFALPHNNKHVTDPLP
LGSLVSPSASSSEPGLVVVIPTTGKITYWESIASAATLDLIKLKSNGVGSTISGMLSGET
VVQLLNAETAGFILAFSTGRLAYLRVRDGHGRPEISVQFLRGSSGPLAGGIFGSLRNALS
SSAWRGDIAAVRAGPQEHVGDRNVVVATGKGRIQLWNLQRDGQNALHAEAEGREAIVMEI
KKAEPTLSDFSLETFEVLDFTFTPRSSEERYDVGDHLLLLTSLSNRYTSHYTLVDVVLRR
DQLIVEDVRLLKSYTTMVNKHAISKARIYLPSPGLVAYIVFDRAVVVVSRGKQSDSPDSQ
LLSENHTLSPSFEDVVDFREDTNVEIVGSGMEEPQNSQHGIEEAKSRRYKARHPATVLLV
RGGGVIRVAATDVDKLTSSTRQQVTAKSKLEQAVFYGTMAQNPLSFAGRSELQFPAEEVG
AAALELSTEIVESTTNFIPSVSASLEQHLKRRAAALHDLAKHLKVAGVELDRVTRWKLLW
DAERMTAATIIWQRYDARIRELPEGQKRGLLAELVDHIHENFKTEPVTEKGEVDRVRHFF
IHDVAKLHLAIPWAFQILKYAWQDGQNSPASVVETLSQSNDMMICALEGAFDFRMNNLRL
YGLQSEILSHGILEEGYEGLPEFWTSTFYVAENVRKQTDLVSMLLGEYWNKPATEGSADP
AILDKIRLEYPALIDMAIRSNVERIRWVSAQDSPQLQMQAEGLQNLQSVSQDKQLQNLSD
TWELPDEAMAIAEKHEILQTLASVLMYEVVSCADALRTPGIGEDECEHLRNRERELNERM
DKYFANFGASWAAALYEHYISNGQVQQMLNEYQIHQAFLTAFLRDKPEYAKIGWIHEITR
EKDYDEAARMLLELGLDRERDVWSKKVELSIGKLSRMAGRNYSQTNGILIPDGGEAELVR
ANQELGLIKIQDLIYKYIYPTISTAIDDKAEVQLALETHGNKSLKQQFSFMNLLENSMTQ
LIKHESMDAFSLVDLLTLMADDFRAMEQDDFSITRFYWALEAIRLGVSNKEEKLLMQRVI
WRRCLLRDDWAAMNNTEAKDDQFVEDQLKTTALYWTLKNCFKNRIFEKDLTIKPLSPQEV
IGACTDELEQRWSRIDASMRKRMMEDYQMKTKEAARTLEDLERSIADNEKERAESMLLSR
PRHRARPKFDGRSSASGSVRAGSFRSSVKLY
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgcccgcagtcaatgctggtgctcctgctccagtgaggagtagtagaaggcgg
ccacggccttcttcgaacgagaattcattagcacaaccaaagagcaagagagttcgaagc
tcatacgatgatcagacttttgcgccaaatggtacactcgaaatggatgaagcaaaaagc
aataaagtagctactttagtgaggcgcgaaagtcccaaggaggtcccaaatccaagacgg
gagatagcagtaagaggcaagaagtcgaaaggagcagaaaggcctggaaagggagatggt
agcgtggtccttaccaagaacgatacctacacagttagtaaacttccagctcttccagac
caaattcgcacagatattacagctcgtctacacggcgcaatatattctgatagtggttat
gcacttgctctcacccattctcacgcatttgtctggccatacgcaatcaacattccttcc
cccgaaacttttacattcgctttacctcacaacaataagcatgtaacagatcctcttcct
cttggttcgctggtctcgccttctgcatcatcttcggagccaggccttgttgttgttata
cctactaccggaaaaattacatattgggaatctatcgctagtgccgctacacttgacctg
atcaaactgaaaagtaatggagtaggatcaactatatcaggaatgctttccggggagacc
gttgtgcaacttttgaatgcggaaacagccgggttcatcctggcattcagtaccggaagg
ctagcttatttgagagtcagagatggacatggaaggcccgagatatctgttcaattcctg
agaggatcaagcggacctttagcagggggtatatttggcagtttgcgaaatgcgctgtct
agctcagcatggcgtggagatattgccgcggttcgcgccgggccacaagagcacgtagga
gaccgaaatgttgtcgtcgcaacaggaaagggaagaatacaactctggaatcttcaaaga
gatggacagaatgcgctgcatgccgaagctgaggggcgggaagcaattgtaatggaaatc
aaaaaagccgagcctactctatccgacttctcattagaaacgttcgaagttctcgacttc
actttcacgcctcgatcgtcagaggagcgctacgacgtaggagatcacctgctgttgcta
acctccctctccaatcgatatacaagtcactacacccttgtcgatgttgttcttaggcgg
gatcagttgatcgtggaagatgttcgactactcaaatcttacaccaccatggtcaacaaa
catgcaatttcaaaagctcgaatttacctaccgagtccaggtcttgttgcctatatcgtc
tttgaccgtgccgtagttgttgtttccaggggaaaacaatcagattcgcccgactcgcag
cttctttccgaaaatcatacactttcaccgtcgtttgaagatgtagtagacttcagagaa
gatacaaacgttgagatagtcgggtcgggcatggaagaaccccaaaatagtcaacatgga
attgaggaagcaaagtcgcgcagatacaaggcaaggcatccggccaccgttttgttggtt
cgaggtggaggtgtgatacgtgtggcggccaccgatgttgacaaactcacatctagcaca
agacagcaagtcactgcaaaaagcaagctagaacaagcagtattttacggcacaatggca
caaaatcctttgagctttgcgggacgatcagaattgcaatttcctgcggaagaagttgga
gcagctgctttggaattgagcacagagatcgtggaatctacaaccaacttcattccctca
gtttctgcctcgctcgagcaacatctcaaaaggcgggcagcagctcttcatgatcttgct
aagcatctcaaagtggctggcgtagagcttgacagggtcacgcggtggaagttactttgg
gatgcagaaagaatgacagcggctacaattatctggcagcggtacgacgcccgcattcga
gaactacctgaaggacagaaacgggggcttctcgcagaacttgtggaccacattcatgaa
aattttaaaacagagcctgttactgagaagggcgaagtcgatcgtgttcgacattttttc
attcatgatgttgctaaattacatttggcgataccatgggcctttcagattctcaagtat
gcatggcaggacggccaaaattctcctgcttctgtagttgagacattaagtcaatctaac
gacatgatgatttgtgcattggagggtgcatttgactttcgcatgaataacttacgacta
tatggattacaatcggaaatattgtcgcatggaatcttagaagaaggctatgaaggactc
ccagagttttggacctcgactttctacgtcgccgaaaacgttcgaaagcaaacagacctt
gtctctatgctactcggagaatattggaataagcctgctacggaaggaagcgccgatcct
gcaatcctcgacaaaatacgattagagtatcctgctctaatcgatatggctatccgatcc
aatgtggagaggatacgctgggtgtcggcgcaagactctccacaactacaaatgcaggcc
gaaggtcttcaaaacctacaatcagtttcgcaagataaacagctacagaatctttccgat
acatgggaactccctgatgaagcaatggcaattgcagaaaaacacgaaattctacagacg
ttggcctctgttctaatgtatgaggttgtctcatgtgctgatgcacttcgcacaccgggc
attggcgaagatgaatgtgaacatcttagaaatcgagaaagggaacttaatgagcggatg
gacaagtattttgcaaactttggtgccagctgggctgccgctctctatgaacattatatc
agcaatggacaagtccaacaaatgcttaatgagtatcaaattcatcaagcattcctcacc
gcgttcctccgtgataaaccggagtatgcgaagattggttggattcatgagattactcga
gaaaaggattacgacgaggccgcaagaatgcttcttgaactcggattagatcgggagcga
gatgtctggagcaaaaaagttgagcttagcattggcaaactttcgcgtatggcgggccga
aattacagtcagacaaacggaatcctcatccctgacggaggtgaagcagaacttgtcaga
gcaaatcaggagctaggattgatcaaaatccaagacctgatttacaaatacatatatcct
accatcagcacggccattgacgataaggctgaagttcaacttgctttggaaactcatgga
aataagagtttgaagcaacaattctctttcatgaatcttctcgaaaatagcatgactcaa
ctcatcaagcatgagtctatggatgctttcagtttggttgatttgcttaccttgatggct
gatgattttagagccatggaacaagatgacttcagcattaccaggttttattgggccctc
gaagctatccgtttaggtgtttcaaataaagaagagaagttgctcatgcaacgtgttatc
tggagaagatgtctcttgagagatgactgggctgcaatgaacaataccgaggcgaaggac
gatcaatttgtggaagatcaattaaagacaacagctttatattggacactcaagaattgc
ttcaagaatcgcatcttcgaaaaggatctcacaatcaaaccactaagtcctcaggaggtt
attggggcatgcacagatgagctggaacaacgatggtctcgaattgacgccagcatgcgt
aaacgcatgatggaagattatcagatgaagacgaaagaggcggctaggactctggaggat
ctggagaggagcattgcggataatgagaaggagagggcggaaagcatgttattgtcgagg
cctagacatagggctagaccaaagtttgatggaagaagcagtgctagtgggagtgttcga
gcgggtagttttagaagctcggtcaagttatattga
DBGET
integrated database retrieval system
