Sclerotinia sclerotiorum: SS1G_04432
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Entry
SS1G_04432 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03030
DNA replication
ssl03410
Base excision repair
ssl03420
Nucleotide excision repair
ssl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SS1G_04432
03410 Base excision repair
SS1G_04432
03420 Nucleotide excision repair
SS1G_04432
03430 Mismatch repair
SS1G_04432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssl03032
]
SS1G_04432
03036 Chromosome and associated proteins [BR:
ssl03036
]
SS1G_04432
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_04432
DNA replication proteins [BR:
ssl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
SS1G_04432
DNA Replication Termination Factors
ELG1-RFC complex
SS1G_04432
Chromosome and associated proteins [BR:
ssl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
SS1G_04432
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
SS1G_04432
Check point factors
HRAD17(Rad24)-RFC complex
SS1G_04432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
AAA_11
RuvB_N
AAA_16
AAA_assoc_2
SLFN-g3_helicase
AAA_28
AAA_14
Mg_chelatase
AAA_5
Gp44_lid
AAA_7
DUF815
AAA_19
AAA_24
nSTAND3
DNAX_ATPase_lid
AAA_2
ARM_ECM29_C
AAA_30
RNA_helicase
AAA_18
ResIII
bpMoxR
AAA_3
Motif
Other DBs
NCBI-GeneID:
5490797
NCBI-ProteinID:
XP_001594625
UniProt:
A7EGJ1
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MASFFDIKARKAEAASNGTANIKEKPKGNNRMQPWVEKYRPKGLGDVTAQDHTITVLQRT
LQSSNLPHMLFYGPPGTGKTSTVLALAKELYGPELIKSRVLELNASDERGISIVREKVKD
FARMQLSNPSPAYRQKYPCPPYKIIILDEADSMTQDAQSALRRTMETYSRITRFCLICNY
VTRIIDPLASRCSKFRFKSLDKGNAVVRVKEIADKEGVKLEEGAVEALIRCSEGDLRKAI
TYLQSAARLVGAISLKDGEGDNEDKMDVDAKMVTVSSVEDIAGVIPDNTIEKLVKAMQPK
SRGVVYDAVSKVVVDMVADGWSGTQVVSQLYQTIVNSEFIADTHKNKIVALFSEADKRLV
DGADEHLTILDLSLRISNILAFGDFERGWWEFGVVEVGVEEESFIGVGFVYV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggctagcttcttcgatattaaagctcgtaaggcggaagctgcgtcgaatggcaccgcc
aatatcaaagagaagcctaagggaaataatcggatgcagccatgggttgaaaaatatcgc
ccaaagggcttgggagatgtcacggcacaagatcataccattactgttttgcaacgcaca
ctccaatcctctaatcttcctcatatgctcttctacggccctccaggtacgggtaaaaca
tccactgttctcgctctcgccaaggaactttacggccccgaacttattaaatcccgagtc
cttgaactcaatgcctctgacgaacgaggaatatccatcgtccgcgaaaaagtaaaagat
ttcgcccgtatgcaactttccaatccttctcctgcctatcgtcagaaatatccatgtcca
ccttacaaaatcattatattggatgaggcggatagcatgacgcaggatgcgcagagtgcg
ttgagaagaacgatggagacgtatagcaggattacgagattttgtttgatttgcaattat
gtgacgaggattattgatccgttggcgagtaggtgtagtaagtttcggttcaagagtttg
gataaggggaatgctgtggttagggtgaaagagattgcggataaggagggggttaagttg
gaggaaggggctgtggaagcgttgattagatgcagtgagggtgatttgagaaaggcgatt
acatatttacaaagtgcagccaggttggttggtgcgattagtctgaaggacggggagggt
gataatgaggacaaaatggatgtggatgcgaaaatggttacagtgagcagtgtggaggat
attgctggagttataccggataacaccatcgaaaagctggtcaaggccatgcaaccaaaa
tcaagaggggtcgtatatgatgccgtatcaaaagtagtcgttgatatggtggccgatggt
tggagtggcacacaggtcgtctcacagctttaccaaaccatcgtcaactccgaattcatc
gccgacacccacaaaaataaaatcgtagctctcttttcagaagcagacaaacgacttgtg
gatggtgcagatgaacatctcactatcctcgacttgtcattgagaatatccaacattcta
gctttcggggatttcgaaagaggatggtgggagtttggggtggtggaagttggggttgag
gaggagagctttattggcgttggctttgtttatgtgtaa
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