Sclerotinia sclerotiorum: SS1G_04574
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Entry
SS1G_04574 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
SS1G_04574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssl03021
]
SS1G_04574
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_04574
Transcription machinery [BR:
ssl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SS1G_04574
RNA polymerase I system
SS1G_04574
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
SS1G_04574
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW5_SPT5
Spt5_N
KOWx_SPT5
Spt5-NGN
CTD
KOW4_SPT5
KOW2_Spt5
KOW
Cornifin
DUF3912
Motif
Other DBs
NCBI-GeneID:
5490902
NCBI-ProteinID:
XP_001594766
UniProt:
A7EGY2
A0A1D9PVT1
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MSTSNLLNNSFDESDEEDDNFNPQPADLSDNEDEDRNTSSAKRRNETSRHQVGDEDGSED
ESAQASGRKTNSGGAADDEEEDDEGEGDDTAAGAHDDDDDEEEDEEEEEDDDEEEITGHR
RKRRRDRRNVFLDVEAEVDEDEDENEDDEDELNEMKDTFIADTHPDDMADLPDGGETDDR
RHRDLDRRREMEASLDAEKQAEILRQRYANKGRSSRGSGESAVVPKRLLLPSVDDPSIWA
VRCKEGKEREAVFSIMKRIEERTGTKEELAITCAFERGGTQSTMKGFIYVEAQRQADILT
AMDGLMNVYPRTKMQLVEIKEMPDLLRVTKSPTVEVGAYVRLRRPAKYAGDLAQVMEVTD
TGLELRVRYVPRLDYGLHEDTNVVDGKRKRPVAGPRPPQRLFSEAEAKKRHAKHLQGRPD
TKTWNYFNEEYINGYCEKEVKIQALITKDVNPTLEEVTRFASGAEDGTENLDLNALAASL
KASTANASYLPGDVIEVYEGEQKGVVGKAVSVTGDIVTMAVSEGALKGQTIEIPIKGLRK
RFREGDHVKVIGGSRFRDEVGMVVKIIEDRVTLLSDQGNNEITVFSKDLREASDSGGSGA
LGKYELWDLVQLDPSTVGCIIKVDRESLVVLDQNGSNRTVIPSQISNKLEKRRNAVATDR
NGAEIKMEDGVKEFGGEGRAGKILHIHRAYLFLKSSELTENAGVFVARTTSVQSVSAKGG
RIAGNASSSPDLSSMNPAMKLNPKNNGQMLPPKSFGRDKSIGQTVTIRKGPYKGLLGIVK
DTTDTNARVELHTKSKVISVPKDCLGFKDKVSGASIDPSGFRGGPGGGRGGGAPRGRGGF
GGATPGPGWDAGAGGRTPMPGGLPERTPAWGRTPHGGGQGGRTPAWKSGATDGGRTPGWA
NDGSRTVYANDGSRTAYGGGNRTPAWSSGAKTPAYGLSDNFGSKTPAYGGSGSSGDAWGS
KTPAYQPNNSNDNWNSGPSNNNNWGSAYDAPTPGGPLSAPTPAAMNAPTPGGYSAPTPAA
MNAPTPGAYSAPTPAPGYWGAPTPQAMDAPTPGQGYYAGAPTPGAYAAETPAGNWQEDGP
RYVD
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttcaaacttactaaataattcctttgatgagagcgacgaagaggacgataat
ttcaatccccaacctgcggatctttctgacaacgaagatgaagaccgcaatacaagtagt
gcgaaaagacgaaatgaaacttcgcgtcatcaagtaggagatgaagatggctctgaggat
gaatctgcccaagcgagtgggcggaaaaccaactcaggcggtgctgctgatgatgaggag
gaagatgatgaaggcgaaggcgatgatactgctgcaggcgcccatgatgatgatgatgat
gaggaagaagatgaggaagaggaagaagatgatgacgaagaggaaattacgggacaccgc
cgtaaacgtcgcagagaccgtcgcaatgttttcctcgatgttgaagccgaagtggatgaa
gatgaggatgaaaatgaagatgacgaggatgaattgaacgaaatgaaggatactttcatt
gcagacacacacccagatgatatggcagaccttccagatggtggtgagacagatgacagg
cgtcaccgagatttggataggagacgtgaaatggaggcaagtcttgatgcggaaaagcaa
gccgaaattttgcgacaacgatatgcgaacaaaggtcgctcctcaaggggcagtggagaa
tcagcggtcgttccaaaacgtctcttacttcctagtgtcgatgatcctagtatctgggct
gtaagatgtaaagaaggaaaagaaagagaggccgttttctcgatcatgaagcgcatcgaa
gagagaactggtaccaaagaagaacttgcgattacttgcgcttttgaacgtggtggaacg
caatctacaatgaaaggcttcatttacgtcgaagcccaacgacaagccgatattttgact
gctatggatggccttatgaatgtctatcctcgaactaaaatgcagctagtcgagattaag
gaaatgccagaccttctcagggttacgaaaagtccaactgtagaggttggagcttatgta
cgacttaggcgtccagcaaaatatgctggtgatcttgcccaggttatggaagttaccgat
actggccttgaattacgtgtcagatatgtacctcgtctcgattatggtcttcatgaggat
accaatgtagtagacggaaagagaaagcgtccagtggctggaccgcgcccgccccaacgg
ctcttcagtgaagccgaagccaagaaacgacatgcaaaacatttgcaaggccgacccgac
acgaagacctggaactactttaatgaggaatatatcaatgggtattgcgagaaggaggtc
aaaatccaagcacttatcactaaagatgtcaatccaaccctcgaggaagttacaagattt
gcctcgggtgctgaagatggaaccgagaacttggatctaaatgctcttgctgctagcttg
aaagcaagcacggccaatgcttcttatctaccaggcgatgttattgaagtttacgagggt
gaacagaaaggtgtcgttggtaaagcagtatctgttacaggtgatattgtcacgatggct
gtgtctgaaggagcattgaagggtcaaaccatcgaaatccctatcaagggtctacgcaaa
cgtttccgtgagggtgatcacgtcaaagttattggtggaagtagatttagggatgaagtg
ggtatggtcgtcaagataattgaagatcgtgtcactttgttgagtgatcaaggtaacaat
gagatcaccgttttcagcaaagatcttcgagaggcgagcgattctggtggcagtggcgct
ttaggaaagtacgagctatgggacttggttcaattagatccatctactgttggttgtatt
atcaaagttgaccgcgagtcacttgtcgttcttgatcagaatggctctaaccggacagtt
attccatctcaaatctccaacaaacttgaaaagcgaagaaatgcagtggcaacagatcgt
aatggtgccgagatcaagatggaggatggtgtgaaggaatttggaggagaaggtagagct
ggcaagattctacacatccatcgcgcctatcttttcttgaagagctcggaactgactgag
aatgccggtgtattcgttgcgcgaacaactagcgttcaaagcgtctctgctaagggagga
cgcatcgctgggaatgcctcatcttcaccggatctcagctctatgaacccagcaatgaag
ctgaatccgaaaaataatggccagatgcttccaccaaaatcatttggccgtgataagtct
attggacagacggtgacaattcgaaaaggtccatacaagggtttactcggcattgttaaa
gataccacagacaccaatgccagggtagaactgcacacaaagagcaaggtaatcagtgtt
ccaaaggactgtttgggattcaaggataaggttagtggtgcatcgatagatccaagcggt
ttcagaggtggtcctggtggtggtaggggaggaggagctccaagagggcgtggtggtttt
ggaggtgcgacccctggtccaggttgggatgctggtgcgggtggacgaacaccaatgcct
ggtggccttcctgagcgtactccagcttgggggagaactcctcacggtgggggccaaggt
ggacgaacacctgcctggaagtctggagccactgatggtgggcgtacacctggttgggcg
aatgatggatctcggaccgtttatgcaaatgacggtagccggacagcctatggaggtggc
aataggactcctgcttggtcatctggtgctaaaactccagcttatggcttatcagataat
tttggatctaaaactcccgcatatggcggtagtggtagctctggagatgcatggggctca
aagactccagcctatcaaccaaataattcaaacgacaattggaactctggcccatccaac
aacaacaattggggttcggcttacgatgctccaacccctggcggtcctttatcggcacct
actccggctgcaatgaatgctccgactccaggtggatattccgctccaacaccagctgcc
atgaacgccccaacgcccggagcttattcagccccaactccagctccgggttattggggt
gctccaacacctcaagcaatggatgcacctacaccaggacaaggatattatgcgggagct
cccacacctggtgcatatgcagcggagacaccagcaggtaattggcaggaggatggacct
agatacgtggattaa
DBGET
integrated database retrieval system
