Sclerotinia sclerotiorum: SS1G_04596
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Entry
SS1G_04596 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03022
Basal transcription factors
ssl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SS1G_04596
09124 Replication and repair
03420 Nucleotide excision repair
SS1G_04596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssl03021
]
SS1G_04596
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_04596
Transcription machinery [BR:
ssl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SS1G_04596
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SS1G_04596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
5490368
NCBI-ProteinID:
XP_001594788
UniProt:
A7EH04
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MPKPLPLTALDQWVQPKSKRQKDQALSLLSRLHIVDITALSREDPQTVALTKSFGTSLRL
ALTGGGNHQSFGVPSSDHIAPHVDIDFLDVHARMQWEGILHYMVNNVAAGSGQEGSGPAG
SVKKLLDAGKLVTRGRSVGITQAGFSFLLQEANAQVWTLLLLWIENAESMGMDSVDVLSF
LFMLGSLELGRAYSTTTLTDAQHNMLGNLIDFGLIYLPPSAPTQFFPTRLATTLTSDASA
LRTVSAGFDAASKSAANQKGFIIIETNYRLYAYTNSPLQIAVLSLFTKLNTRYPNMVSGR
VSRDSIRTAISHGITSDQIITYLSTHAHPQLVKASTAAHGGPVLPPTVVDQIRLWQLENE
RMKAVPGFLFKEFDGQKEYEGCAKYAEEVGVLVWKNDAKRMFFVTRVEQLRDYIKARKIK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcctttacctctcacagctctggatcaatgggtgcaaccgaagagcaagagg
caaaaagatcaagccctatccttactatcgcgactgcatattgtcgatattactgcgctg
agccgagaagatcctcagactgtagctctgactaaaagtttcggaacttctttacgactg
gcacttactggtggagggaatcatcaatcttttggagttccttcgtcggatcacattgcg
ccacacgttgatatagatttcttggatgtacatgctcgaatgcaatgggaggggattcta
cattatatggtcaataatgttgcagcaggttccgggcaggaaggaagtgggcccgcaggt
tcagttaagaaactactcgatgcaggaaagttagttacaagagggcgaagtgtgggtatc
actcaagctggattctcatttttattacaagaagccaatgcgcaagtctggactttactt
cttttatggattgaaaatgctgagagtatgggaatggattccgttgatgtactctctttc
ctattcatgctaggttcccttgaactcggacgtgcatatagcaccacaaccctcacagat
gctcaacacaatatgctcggcaacctcatcgactttggcctgatttacctccctccttcc
gctcccacacagttcttcccaactcgtcttgctacgaccctcacctcagacgccagcgct
cttcgtaccgtgtcagccggtttcgatgccgcttccaaatccgccgctaaccaaaagggc
ttcataattattgaaaccaactaccgcttatacgcctacacaaattctccgcttcaaatt
gccgtcctctcactctttaccaaacttaacactcgataccccaacatggtcagcggccgc
gtctctcgtgattccatacgtactgccatatctcacggtatcacttccgatcaaataatc
acctacttatccacccatgcgcacccgcaactcgtcaaagcctctactgcagctcatgga
ggaccagtattaccacctacggtcgttgatcaaattcgtctctggcaattggaaaacgag
agaatgaaagcagtgccggggtttttgttcaaggaatttgacgggcagaaggagtatgaa
gggtgtgcgaaatatgccgaagaagtaggagtattggtttggaagaatgatgcgaagagg
atgtttttcgtaacgagggtggagcagttgagggattatattaaagcgaggaagataaaa
tag
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integrated database retrieval system
