Sclerotinia sclerotiorum: SS1G_04682
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Entry
SS1G_04682 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SS1G_04682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_04682
03041 Spliceosome [BR:
ssl03041
]
SS1G_04682
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
SS1G_04682
Spliceosome [BR:
ssl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
SS1G_04682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
SPATA1_C
DUF5946
Casc1_N
Motif
Other DBs
NCBI-GeneID:
5491116
NCBI-ProteinID:
XP_001594874
UniProt:
A0A1D9PVI1
A7EH90
LinkDB
All DBs
Position
Unknown
AA seq
211 aa
AA seq
DB search
MAIDEIVTDPSLKLALETSNQTREQAIALLDFVSTASTTSAPSNEVLLQISKQQKLLLTY
LAQLRGLHRDSHAGARETKALTAEARQEVDRLHLQLQNLYYEQRHLQGEIAACESYDHKY
QQLPLIPVDEFLAQHPEHADADENALMIARIDHEHQERLKLEEQRQGLLKKKQGLIADNK
KRKDDLANLDKDLEKFIDAAKPIQKTFERVV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgacgagatagttacagatccatctcttaaacttgcccttgagacctcaaat
caaacgcgggaacaagcaattgctctcctagacttcgtatcgacagcctctactacttcc
gctccttcaaacgaagtcctactgcaaatctctaaacaacaaaaactactcctcacatac
ctcgcacagttgagaggtttacatcgtgattctcatgctggcgcccgagaaacaaaggct
ttaaccgcggaagcacgtcaggaagtagataggctgcatttacaactacaaaatttatac
tatgaacagcggcatctacaaggagagattgctgcttgcgaatcatatgatcacaaatat
cagcaacttcccctgatacctgttgatgaattcttagcccaacatccggaacatgctgat
gctgatgagaatgcgcttatgattgcaaggatagatcacgaacatcaagagagattgaag
ttggaggaacaaagacaaggactcttaaagaagaaacaaggattgattgccgataataag
aagaggaaggatgatctagcgaatcttgacaaagatttggagaaatttattgatgccgca
aaaccgatacaaaaaaccttcgagcgtgtggtataa
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