Sclerotinia sclerotiorum: SS1G_04983
Help
Entry
SS1G_04983 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SS1G_04983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssl03009
]
SS1G_04983
Ribosome biogenesis [BR:
ssl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SS1G_04983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
WD_LRWD1
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_NWD2_C
KNTC1_N
Utp12
Motif
Other DBs
NCBI-GeneID:
5489600
NCBI-ProteinID:
XP_001593556
UniProt:
A7EI41
A0A1D9Q9H6
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MAAPVTSLPAVKLPTAPSPITPEQRYWKGFRSQQLIPSPTNYPITHISFPPPPTNALLPS
SNDYFCVTTGTRLQIYSIRTRKLVKTITRFSDVAHSGEIRRDGRVMVAGDETGKIQVFDV
NSRAILKTWDEHKQPVWATKFSPTELTTLMSASDDRTVKLWDLPSQESTTTFTGHTDYVR
SGAFMPGSMSNMVLTGSYDETVRLWDPRVPTRAAMTFKHAAPVETVLPMPSGTTVLAAAD
NQISVLDLVAGKPLHIIKNHQKTVTSLCLASNATRLVSGGLDGHVKVFETTGWNVVTGLK
YSAPVLSVNIVSSGANREDKHLVVGMQSGVLSIKTRLSGQQKVKERERAKEMQALLDGTL
EEYDKKNKKRKHTSGVEKRLRGMDFMGEGADVVIEGNTRSTKRKVPEWERELQQGRYHQA
LDCVLQKGLPAVTVLTLLTALRHRSAMRAAFEKRDETTIQPIFKWVSKHITDPRYVPICT
DAAMLLLDIYAEYTCDSPDLEHQIRFLHRRVRAEVERSQKAMQVKGMLDLLVAGVK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaccagtgacaagtctgccggcagtgaaacttcctactgccccttcgccaatt
acacctgaacaacgatattggaaaggatttcgctcacagcaactcattccatcaccaacg
aattatcctattacgcatatatcattccctcctccaccaacaaacgctttactgccctcc
agcaatgattatttctgtgtgacgaccggtacccgacttcaaatttactcgattcgcaca
cgaaaattagtaaagactattactcgattttcagatgttgcgcatagtggagagattcga
cgagatggacgtgtaatggtggcaggtgacgaaactggaaagatacaagtctttgatgtg
aattcaagagctattttaaaaacatgggacgaacataagcagcctgtctgggcgacaaag
ttttcaccaacagaattgacaactctcatgagtgctagtgatgaccggactgttaagctt
tgggacctgccaagtcaagaaagtacaacaactttcactgggcatacggattatgttaga
agtggtgcttttatgcctgggtcgatgtcaaatatggtcttgactggtagttatgatgag
actgttagactttgggatcctagagttccaactagagcagctatgaccttcaagcatgct
gcgccagtcgaaactgtacttcctatgccttcaggtacaacggttcttgctgcagcggat
aatcaaatctcagtccttgatttggtcgcaggaaagccattgcacattatcaagaatcat
cagaagacggtcacatcgttgtgcctcgcatcgaacgctacgagattggttagtggtggt
ttggacgggcatgtgaaggttttcgagaccactggatggaatgttgttactggattgaaa
tattcagctcctgttttatcagtcaacattgttagttctggtgctaatcgagaggataaa
catttggttgtgggtatgcaatctggggtattgtcaatcaaaacgcgtctatcaggtcaa
caaaaagttaaggagagagaaagggcgaaggagatgcaagcattactcgatggcacatta
gaagaatatgacaagaagaacaagaaaaggaaacatactagcggggtagagaagaggctt
agaggcatggatttcatgggtgaaggggcagatgtggtaattgagggtaatacacgttca
acaaagcggaaagttccagaatgggagcgtgaacttcaacaagggagatatcatcaagca
ctagactgtgtgcttcagaagggcctacccgcagtcactgttcttacacttctcacagct
ctacgacacagaagtgccatgcgagcagcgtttgagaagcgtgatgagactacgatacaa
ccgattttcaaatgggtgtcgaagcatattactgatcctcgatacgttcctatatgtact
gatgctgctatgttgctcttagacatatacgcagagtatacctgtgattcgccagatctg
gaacaccagatcagattcttacatcgacgcgtaagagcggaagtggaaaggtcacaaaag
gcaatgcaggtcaagggtatgctagatttgcttgtggctggggtaaaataa
DBGET
integrated database retrieval system