Sclerotinia sclerotiorum: SS1G_04986
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Entry
SS1G_04986 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SS1G_04986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssl03019
]
SS1G_04986
Messenger RNA biogenesis [BR:
ssl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SS1G_04986
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SS1G_04986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
EAD9
WKF
Mu-like_Pro
Motif
Other DBs
NCBI-GeneID:
5489603
NCBI-ProteinID:
XP_001593559
UniProt:
A0A1D9Q9E0
A7EI44
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MAARKLQQEVDKCFKKVTEGVAEFESIYEKIEQCTNAAQKEKLEDNLKREIKKLQRLRDQ
IKTWAASNDIKDKGPLLDHRKLIETQMEKFKAVEKAMKTKAYSKEGLSAAAKLDPKERAK
METGEFLGNMVEELERQIETMEAERESISATMKKGKTQSAKADRIAELDNLTERHKFHQN
KLELIKRCLENGNVEVDQVKDLEESIKYYVTDNMNDDFMEDEEMYDELNLDEEEDNYGMN
NDNDRVSSQDTQSIQEDIPDTDQRSNSLPGKSKTGPEPPLAAARRPSTQLKSPLPSLATL
HTPLSTLSTNGSSSNLMKPAAVPTRAPGETLKYASAAAAAAASDKNGIAPLPPPPEALPP
PSTSASHPPLSGNAGRRPSVTASPTTIHSQTASVNQTPVTRSSVPTTDTPSSAQTKSPAL
SQSSAAPSGASVSHSVEKTENSKPNVSSTPSGKAPALSKTAEGKRGSSNAIPYKSSANSS
MQAVPPQSNGVSNGLKPSTPENTESVYHLPSGFQDMLQSFEVIQKSAPDALSTASQRMLA
SSQASGPGMQDISSPRSYKPETPFNTPSYYPQDVPSVLDDPRLYNRIDGETLFYVFYYKQ
ATYQQYLAAKSLKEQSWRFHKQYQTWFQRHEEPKEITELYEQGTYRFFDYESTWMNRRKA
DFKFTYKFLEDDV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgaaaacttcaacaagaagtcgacaagtgcttcaaaaaagtcaccgaagga
gtggcagaattcgaatcaatctatgaaaagatagaacagtgcacaaatgctgcgcagaag
gagaagctggaggacaacctcaaacgagagatcaaaaagctgcaaaggctccgtgatcag
atcaagacatgggcggcaagtaatgacataaaggataagggtcctctgttagatcatcgg
aaattgattgaaacgcaaatggagaagttcaaagcagtagagaaagccatgaagacaaag
gcatattcgaaagaagggttgtcggcggctgccaaactagatcctaaagagcgcgcgaaa
atggaaacgggagaattcttgggaaatatggtagaggagcttgagcgccagatcgagaca
atggaagccgaacgcgaatcgatatcagcgacaatgaagaaggggaaaacccaaagtgcc
aaggctgataggatagcagagctagataatctgactgaacggcataaattccatcaaaat
aagctggaactcattaaacgctgtctggagaatggtaatgtcgaggttgatcaggttaaa
gatcttgaggaatccatcaagtattatgtgaccgacaacatgaacgatgacttcatggag
gacgaggagatgtacgatgagcttaaccttgatgaggaagaagataactacggcatgaat
aatgataatgatcgggtgtcatcacaagacacgcaatcgatacaagaggacattccagat
acggatcaacggtcgaatagtttacccgggaaatcgaagacgggtcccgaaccacctttg
gctgctgcacggagaccttctacacaactgaaaagccctcttccttcattggccacttta
catactccattatcgacgctatcaacaaatggaagttcaagtaaccttatgaaaccagct
gcggtacctacacgtgcccctggggagactctgaaatatgcctcagcagcggccgcagct
gccgctagtgataagaacggtattgcgcctttgccacctccacctgaagcccttccgccc
ccctcgacgtcagccagccacccaccattatctggaaatgccggacgaagaccaagtgta
acggcatctcccacgactatacattctcaaacagccagtgtcaaccagacacccgtgaca
agatccagtgttccaactacggatacaccatcaagtgcccaaacgaaatctccagctttg
agccaatcaagtgcggcgcctagtggagcaagtgtctcccattcagttgaaaaaacagag
aattctaaaccaaatgtgtcctcgactccgtcaggaaaggcgccagccctatctaagaca
gcggaaggcaagagaggttcgtcaaatgctatcccatataagtccagtgctaacagttct
atgcaagctgttccaccgcaatcaaatggggtgtcgaatgggcttaagccgagtacacca
gagaacacggaatcagtatatcatctgccgtcagggttccaggacatgcttcaatctttc
gaggtaattcaaaagagtgctccagacgctttatccactgcatcacagagaatgctggca
tcatctcaagctagtgggccaggcatgcaagacatatcatctcctcgaagctataaacca
gagaccccttttaacacaccatcatattaccctcaagatgtcccttcggtgcttgatgac
ccacggttgtataatcgtatagatggggaaacattattctatgtcttctactacaagcaa
gccacatatcaacagtatcttgcagctaaatccttaaaggaacaaagctggcgattccat
aagcaatatcagacttggtttcaaaggcatgaagagccaaaggagattactgagctgtat
gagcaagggacctaccgtttctttgactacgaaagcacatggatgaaccgaagaaaagca
gactttaagtttacctataaattcctagaggacgatgtatga
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