Sclerotinia sclerotiorum: SS1G_05088
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Entry
SS1G_05088 CDS
T01071
Name
(RefSeq) pseudouridine synthase
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssl03016
]
SS1G_05088
Enzymes [BR:
ssl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
SS1G_05088
Transfer RNA biogenesis [BR:
ssl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SS1G_05088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Auto_anti-p27
Motif
Other DBs
NCBI-GeneID:
5490282
NCBI-ProteinID:
XP_001593660
UniProt:
A7EIE5
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MALVETSAGYAPVEERKPFEEPPAVKDAMERGAIAVNGKPVESTSQIIKNGDVISHTLHR
HEPPVTALPISIVHEDEDIIVINKPSGVPVHPAGRYNYNSVVEIMRAERGHGWNPLPCNR
LDRLTSGIMFIGKHAKAAEALSLQISGRTVRKEYIARVKGKFPDGEVVCDMPILQISPKL
GLNRVRASGKAARTVFKRLAYYPPENLEQVEDSSEPMEPDKSKPSMNKEGYSIVRCLPVT
GRTHQLRVHLQFLGHPIGNDPIYCNQRVWGTRLGENDSDATQDTDEDIITRLSRMGKSEV
ADAVAYHDEMVDEYNKKKAEKMSGELCDICQTPLYTDPGEQELSLWLHSLRYEDAGGSWS
YVSPLPTWALPPVGMDGPTEVGGMEELVKAVKEDNPEIA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgtcgaaacttctgcaggatatgcgcctgtggaagagagaaaaccatttgaa
gaaccccccgcagttaaagatgccatggaacgtggagctattgctgtgaatggcaaaccg
gtcgaatcaacttcgcagattataaagaatggagacgttatatcacataccctgcatcgg
catgaaccccctgttacagctcttccaatatcaattgtgcatgaagacgaagatatcatc
gtcataaacaaaccttccggcgttccggtccaccctgccggccggtacaactataactct
gtagttgaaatcatgagagctgagcgcggacatggctggaatcccttaccgtgtaatagg
ttggataggttaactagtggcattatgttcattggaaagcatgcgaaggctgcagaagca
ctaagtttacaaatatcagggcgcactgtcagaaaagaatatatagcacgagtaaaagga
aagtttccggacggagaagtggtttgtgacatgccaatcctgcagatatcgccgaaattg
ggactgaatcgtgttcgggcgagtggtaaagccgctcgcacagtcttcaagcgcctagca
tattatccgccggaaaacctagaacaagttgaggacagctccgagccgatggagccagac
aagtcgaaaccatcgatgaacaaggagggctattcgatcgttagatgccttccggtcaca
ggacgtacacatcaactcagggttcatttacaatttttgggtcatcctattggtaatgat
cctatatattgcaaccaacgcgtatgggggacacggcttggggaaaatgattctgatgca
actcaagatacggatgaagatattataactcgtctttcaaggatgggcaagtcagaagtt
gctgatgctgtagcctaccatgatgagatggtagacgaatacaacaagaaaaaggccgag
aagatgtccggagagctatgcgacatatgtcagacccctttatataccgatccgggtgag
caggagctatccctgtggctccacagccttcgctatgaagatgctgggggatcttggagt
tatgtgagccctctcccaacatgggctttacctcctgtcggtatggatggaccgacagaa
gttggaggtatggaagagctggtcaaggccgtcaaggaagacaaccctgaaattgcatga
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integrated database retrieval system
