Sclerotinia sclerotiorum: SS1G_05254
Help
Entry
SS1G_05254 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ssl
Sclerotinia sclerotiorum
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_05254
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
SS1G_05254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
bZIP_1
AAA_21
DUF5305
Motif
Other DBs
NCBI-GeneID:
5489989
NCBI-ProteinID:
XP_001593826
UniProt:
A0A1D9Q9X4
A7EIW1
LinkDB
All DBs
Position
Unknown
AA seq
1130 aa
AA seq
DB search
MSSRRRRSRAEVDDDDSSENPTPAQSAKRSRTLHYESEEGTSRPDTSPSSRDEDDRRKVG
GISDSPAIRSGRGKFAPGAIVRVKLNNFVTYESAEFFPGPNLNMVIGPNGTGKSSLVCAL
CLGLGSSPKHLGRADKVGEFVKHGSKDAFIEIELQKRSNERENHIIKTRILKDGNNCEFW
INNKRASHKNVLALVKGFSIQIDNLCQFLPQDKVSEFAALTPVELLHHTQRAVAAQEMLD
WHDELRNLRKEEKSRQMQLDLDKEQLTNLEKRQAGLRPEMERLEERIQIEKNLEKLKNSI
PFVEYRQARLRHTECRNEKIAATKRFKTLESQVEPTLRLVNKKDSLEKKLAKAVSNRKKN
LQLAEAAADELLKKVEEWDDKIGDCDRRVKVVQEAEDKRRKDLAKVRRAIIDLEARLREP
EIEFNAVEYNQRIRAIEQDIKAIQDRIQELRESREVLKSKGRDLRAEQDKAKQDLADFDS
QAGRQINKIAQHSRDTAMAWKWVQDNPNQFEKEVYGPPLITCSVKDPRYTDAVESLFRQS
NMLTITAQTQADYKLLNDQFHSAEMRLAEVRTQMSTQTLAETIGRPSATIAELNSIGLDG
WAIDFIDAPEPVLAMLCNDIKAHRTAVTLQDVTEEQHERIIRAGITSFVTKTTSYKITTR
REYNASSTQTSGINRARFFIDGVVDTSGRRMIEENLQELGRKFEALKEENKDINDKIEQY
SSTMTPKKDEKDAIIADKQQKQKAYGEQRALPGLLAREKESLERLESSSSESRAEIQSIL
KEQDVAGLKKGGDVMKHIEQINQIMVCSEELDEAEARRIEADSDAHALRERNRDIVANLD
AERTRLQEIEAQSKLATETARVALDACRNLRREAEERNDTESLEYFSNISEDRTVESLQQ
EINSEEHKLNYIQANNPNAIREYEKRQVDISRLNTRITSTESELGDVTQKVTQIMRTWEP
KLDALIEQISQAFSHNFEQIGCAGEVGVYKEDDFEKWAIEIKVKFRENETLQLLDKHRQS
GGERSVSTIFYLMSLQSLARSPFRVVDEINQGMDPRNERMVHGRMVEIACQEHDSQYFLI
TPKLLHDLKYHPRMKVLVIVSGEHMPDDNTNFSVKGTLETRRRMRGIAAA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcgaaggcgtcggtcaagggccgaagtcgatgatgacgacagttcggaaaat
cctacaccagcgcagtctgcgaaaagatctcgcacattacattacgaatctgaggaagga
acttctaggcccgatacttcgccatcctctagagacgaagatgacagacgaaaggtcgga
ggcatttccgactctcccgcaatcagatcgggacgcggcaaattcgctccgggagctata
gttcgggtcaagctcaataattttgttacttacgagagtgctgaatttttcccgggtcca
aatttgaacatggtgattggtccaaatggtacgggcaagagttccttggtttgtgccctc
tgcttgggcttgggctcttctccaaaacacctcggtcgggcagataaagtcggggaattc
gtcaaacatggttcaaaggatgcattcatcgaaatcgagctccaaaaaagaagcaacgag
cgtgagaatcatatcatcaaaactcgaattcttaaagatgggaataattgcgaattttgg
ataaacaacaaaagagcaagccataaaaatgttctagctttagtcaaaggattcagcatt
cagatcgataatctttgtcagttcttaccacaggacaaagtttccgagtttgcagcattg
acacctgtcgaactcctccatcatacacaaagagcagttgctgcacaagagatgttggac
tggcatgatgagctcaggaatttgagaaaagaggagaaatcgaggcaaatgcagctcgac
ctagataaggaacaattgaccaatctggaaaaacgacaggcagggctgcgtccggaaatg
gaacgtctcgaagagcgtattcagatcgagaagaacttagagaagctgaagaatagtatt
ccctttgtagaatatagacaggcacggcttcgacatacggaatgtaggaatgagaagata
gcagcaacaaaacggtttaaaactttggagagccaggtcgaaccgactttgcggctagtt
aacaagaaggattcgctggagaagaagttagccaaggccgtttccaatcgcaagaagaac
cttcaacttgcggaagcagctgcagatgagcttttgaagaaagtcgaggaatgggatgac
aaaataggtgattgcgatcggagagtaaaagttgttcaggaggcagaggataaacgcagg
aaagatttagcgaaggttagaagggccataattgacctcgaagcccgacttcgagaacct
gaaatagagttcaatgctgttgagtacaatcagcgcattagagcaattgagcaggatatc
aaagccatccaagacaggattcaagagcttcgagaaagccgagaagtactcaaatccaaa
ggtcgagacctacgagccgaacaagacaaggcgaagcaggacctcgccgacttcgacagt
caagctggaagacaaattaacaagattgcccagcattccagagatactgcgatggcttgg
aagtgggttcaggacaacccgaatcagtttgagaaggaggtatacgggccccctttgatt
acatgttctgtgaaggacccaagatataccgatgctgttgaatcattgttccgtcagagc
aatatgctcaccatcaccgcacaaactcaagctgattacaagctattaaatgatcaattc
cattctgcagaaatgaggttggctgaagtcagaacccagatgagcacccagaccctagcc
gagactattgggcgaccgtcagctactattgccgaattgaacagtataggtcttgatggt
tgggctattgatttcattgatgccccggagccagtccttgcaatgttgtgcaatgatatt
aaagctcataggacggccgtcaccctccaagatgtcaccgaggaacagcatgaaaggatt
atccgcgccgggatcacctctttcgtgacgaaaaccacctcttacaagatcacgacgcga
agagaatataacgcatcatcaacccaaacttcgggaattaatcgagctagattttttatt
gatggtgttgtagacacttcggggcggcgtatgatcgaagaaaacctccaagaactcggc
cgaaaattcgaggccctgaaggaggaaaacaaggacataaatgataagatcgagcaatat
tcgagtactatgaccccgaaaaaagatgaaaaggacgcgattatagccgataaacaacaa
aagcaaaaggcttatggtgaacaaagagctctccctggactgcttgctcgagagaaggag
tctttggagagattggaatcatctagctctgaatctagggcggagattcaatcaatccta
aaagagcaggatgttgctggcctcaagaaagggggagatgtgatgaaacatatcgagcaa
atcaatcagatcatggtttgctccgaagaacttgacgaagccgaagctcgacgtattgaa
gcggattcggatgcccacgctttacgggagcgcaatcgtgatatagtcgcaaaccttgac
gcggaacgtacacggttacaggaaatcgaagcacaatcaaagctggcaactgaaacggca
cgagttgcgctcgatgcttgcagaaatctcagaagggaggccgaggagagaaatgacact
gagtctttagaatacttcagcaatatctccgaggatagaaccgtggaaagtctacagcag
gaaataaacagcgaggagcataaactcaattacattcaagctaacaatccgaatgccatt
cgagagtatgagaaacgccaggttgacattagccgattaaacaccaggatcactagtacc
gagagtgaactaggggacgttacgcagaaggttactcagatcatgaggacatgggagcca
aaacttgatgcacttattgagcaaattagtcaggcattctcgcataattttgagcaaatt
ggttgtgctggtgaagttggtgtgtataaagaagacgattttgaaaaatgggcgattgag
attaaggtcaagttcagagaaaatgagacccttcagcttcttgacaagcatcgccaatcc
ggaggtgaacgttccgtctccactattttctacctcatgtctttacaatcgcttgctcgc
tcccctttccgcgttgttgatgagattaatcaaggaatggatcctcgtaatgaacgaatg
gtccatggacgtatggtcgagatcgcatgtcaggagcatgatagccaatatttcctcatc
acaccaaaattacttcatgacttgaaataccatccaagaatgaaggttctggttattgtg
agtggtgaacatatgccagatgataatacgaatttcagtgtaaaaggtacgctagagacc
aggagacgtatgaggggcattgctgctgcgtag
DBGET
integrated database retrieval system
