Sclerotinia sclerotiorum: SS1G_05346
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Entry
SS1G_05346 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03020
RNA polymerase
ssl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SS1G_05346
09124 Replication and repair
03420 Nucleotide excision repair
SS1G_05346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssl03021
]
SS1G_05346
03400 DNA repair and recombination proteins [BR:
ssl03400
]
SS1G_05346
Transcription machinery [BR:
ssl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
SS1G_05346
DNA repair and recombination proteins [BR:
ssl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
SS1G_05346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
5489797
NCBI-ProteinID:
XP_001593918
UniProt:
A0A1D9QAC6
A7EJ53
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MDYDPMVMDQESSGPQVKITEAGSHHVDFELSNVDLSFANSLRRTILSEVPTIAIDRVQI
EANTSVLADEFIAHRLGLIPLNSKNCDDVIYTRDCDCDGNCELCSVTLTLHARCTGDEIM
KVYARDLVVDPQRANKWVGNPVITDPDGLGPVIAKLRKGQELRMKCIALKGIAKEHAKWA
PTAAVGFEYDPHNKLKHIDLWYEHDAAKEWPKSKYADWEEPPQEGAPFDYDAVPNNFYFE
VESIGNLEPDAIIQQGIKVMQQKLAAVLQDLTEGDGQANGGYDAPQSPDVGMNGQGWQDA
GYTTPYGGGNAWSGAGGAATPYGATPYGQNGQNGW
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggattacgaccctatggtaatggaccaggagtcctcgggacctcaagtcaagatcaca
gaggctggttcacatcacgtcgactttgaattatccaatgtagacctctcctttgcaaac
tccctccgtcgaacaattctctcagaagttccaaccattgctatcgatcgggtacaaata
gaagccaatacgtcagttctagcagatgaattcatcgcccatcgactcggtctcatccca
ctgaactccaaaaactgtgatgatgttatttacactagagattgcgattgcgatggaaac
tgtgaactttgcagtgttacacttacccttcacgcgagatgtacgggagatgaaattatg
aaagtttatgctcgcgatttggtggtagatcctcaacgtgctaataaatgggttgggaat
cctgtcatcactgatcccgatggacttggaccggtcattgccaaattgagaaagggacag
gagttacgcatgaagtgcatagccttgaagggtatcgcaaaggaacacgctaaatgggca
cctacagctgctgtcggctttgaatatgatccacataacaaattgaagcatatcgatttg
tggtatgaacatgatgccgcaaaggaatggcctaaaagtaaatatgcggattgggaagaa
ccgcctcaagaaggtgccccatttgattacgacgccgtaccaaataacttttattttgaa
gtcgaatctattggtaatctagagcctgatgccattattcaacaaggtatcaaggtcatg
caacaaaaattggctgcggtccttcaggatcttaccgagggtgatggacaggctaatggt
ggatatgatgcacctcaaagtccggatgtcggtatgaatggccaaggttggcaggacgca
ggttatactacaccatatgggggtggtaatgcttggagtggtgcaggtggtgcagctact
ccgtatggtgcaactccttatggtcaaaatggtcaaaatgggtggtag
DBGET
integrated database retrieval system
